Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13892 | 41899;41900;41901 | chr2:178635650;178635649;178635648 | chr2:179500377;179500376;179500375 |
N2AB | 12251 | 36976;36977;36978 | chr2:178635650;178635649;178635648 | chr2:179500377;179500376;179500375 |
N2A | 11324 | 34195;34196;34197 | chr2:178635650;178635649;178635648 | chr2:179500377;179500376;179500375 |
N2B | 4827 | 14704;14705;14706 | chr2:178635650;178635649;178635648 | chr2:179500377;179500376;179500375 |
Novex-1 | 4952 | 15079;15080;15081 | chr2:178635650;178635649;178635648 | chr2:179500377;179500376;179500375 |
Novex-2 | 5019 | 15280;15281;15282 | chr2:178635650;178635649;178635648 | chr2:179500377;179500376;179500375 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | None | None | 0.087 | N | 0.373 | 0.012 | 0.350088858571 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.4727 | ambiguous | 0.5877 | pathogenic | -1.627 | Destabilizing | 0.003 | N | 0.235 | neutral | None | None | None | None | N |
I/C | 0.8333 | likely_pathogenic | 0.8854 | pathogenic | -0.904 | Destabilizing | 0.204 | N | 0.395 | neutral | None | None | None | None | N |
I/D | 0.8251 | likely_pathogenic | 0.8926 | pathogenic | -0.899 | Destabilizing | 0.035 | N | 0.482 | neutral | None | None | None | None | N |
I/E | 0.7024 | likely_pathogenic | 0.7832 | pathogenic | -0.842 | Destabilizing | 0.035 | N | 0.445 | neutral | None | None | None | None | N |
I/F | 0.2746 | likely_benign | 0.3279 | benign | -0.958 | Destabilizing | 0.026 | N | 0.348 | neutral | N | 0.454089933 | None | None | N |
I/G | 0.8321 | likely_pathogenic | 0.8998 | pathogenic | -1.998 | Destabilizing | 0.035 | N | 0.461 | neutral | None | None | None | None | N |
I/H | 0.6897 | likely_pathogenic | 0.774 | pathogenic | -1.082 | Destabilizing | 0.747 | D | 0.405 | neutral | None | None | None | None | N |
I/K | 0.6545 | likely_pathogenic | 0.7344 | pathogenic | -1.068 | Destabilizing | 0.035 | N | 0.443 | neutral | None | None | None | None | N |
I/L | 0.1597 | likely_benign | 0.1801 | benign | -0.661 | Destabilizing | None | N | 0.169 | neutral | N | 0.448777195 | None | None | N |
I/M | 0.1743 | likely_benign | 0.2085 | benign | -0.541 | Destabilizing | 0.087 | N | 0.373 | neutral | N | 0.455164241 | None | None | N |
I/N | 0.4041 | ambiguous | 0.5336 | ambiguous | -0.979 | Destabilizing | 0.026 | N | 0.499 | neutral | N | 0.454089933 | None | None | N |
I/P | 0.9681 | likely_pathogenic | 0.9789 | pathogenic | -0.953 | Destabilizing | 0.068 | N | 0.52 | neutral | None | None | None | None | N |
I/Q | 0.6474 | likely_pathogenic | 0.7429 | pathogenic | -1.061 | Destabilizing | 0.204 | N | 0.489 | neutral | None | None | None | None | N |
I/R | 0.5777 | likely_pathogenic | 0.6582 | pathogenic | -0.551 | Destabilizing | 0.204 | N | 0.535 | neutral | None | None | None | None | N |
I/S | 0.393 | ambiguous | 0.5196 | ambiguous | -1.651 | Destabilizing | 0.006 | N | 0.344 | neutral | N | 0.450707854 | None | None | N |
I/T | 0.2154 | likely_benign | 0.2942 | benign | -1.466 | Destabilizing | None | N | 0.201 | neutral | N | 0.362126454 | None | None | N |
I/V | 0.0585 | likely_benign | 0.0639 | benign | -0.953 | Destabilizing | None | N | 0.137 | neutral | N | 0.395927186 | None | None | N |
I/W | 0.9003 | likely_pathogenic | 0.921 | pathogenic | -1.066 | Destabilizing | 0.747 | D | 0.418 | neutral | None | None | None | None | N |
I/Y | 0.6341 | likely_pathogenic | 0.7035 | pathogenic | -0.829 | Destabilizing | 0.204 | N | 0.499 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.