Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13897 | 41914;41915;41916 | chr2:178635635;178635634;178635633 | chr2:179500362;179500361;179500360 |
N2AB | 12256 | 36991;36992;36993 | chr2:178635635;178635634;178635633 | chr2:179500362;179500361;179500360 |
N2A | 11329 | 34210;34211;34212 | chr2:178635635;178635634;178635633 | chr2:179500362;179500361;179500360 |
N2B | 4832 | 14719;14720;14721 | chr2:178635635;178635634;178635633 | chr2:179500362;179500361;179500360 |
Novex-1 | 4957 | 15094;15095;15096 | chr2:178635635;178635634;178635633 | chr2:179500362;179500361;179500360 |
Novex-2 | 5024 | 15295;15296;15297 | chr2:178635635;178635634;178635633 | chr2:179500362;179500361;179500360 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs1288360484 | None | 0.058 | N | 0.611 | 0.24 | 0.537125817887 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
I/T | rs1288360484 | None | 0.058 | N | 0.611 | 0.24 | 0.537125817887 | gnomAD-4.0.0 | 3.75826E-06 | None | None | None | None | N | None | 1.33837E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 4.27117E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.7474 | likely_pathogenic | 0.8082 | pathogenic | -2.293 | Highly Destabilizing | 0.016 | N | 0.545 | neutral | None | None | None | None | N |
I/C | 0.9437 | likely_pathogenic | 0.9544 | pathogenic | -1.518 | Destabilizing | 0.685 | D | 0.609 | neutral | None | None | None | None | N |
I/D | 0.995 | likely_pathogenic | 0.9972 | pathogenic | -1.971 | Destabilizing | 0.637 | D | 0.772 | deleterious | None | None | None | None | N |
I/E | 0.9865 | likely_pathogenic | 0.9915 | pathogenic | -1.896 | Destabilizing | 0.366 | N | 0.752 | deleterious | None | None | None | None | N |
I/F | 0.4259 | ambiguous | 0.4938 | ambiguous | -1.548 | Destabilizing | 0.125 | N | 0.615 | neutral | None | None | None | None | N |
I/G | 0.9792 | likely_pathogenic | 0.9869 | pathogenic | -2.719 | Highly Destabilizing | 0.366 | N | 0.735 | deleterious | None | None | None | None | N |
I/H | 0.9761 | likely_pathogenic | 0.9863 | pathogenic | -1.94 | Destabilizing | 0.869 | D | 0.725 | deleterious | None | None | None | None | N |
I/K | 0.9554 | likely_pathogenic | 0.9753 | pathogenic | -1.698 | Destabilizing | 0.303 | N | 0.741 | deleterious | N | 0.47597012 | None | None | N |
I/L | 0.1526 | likely_benign | 0.1779 | benign | -1.135 | Destabilizing | None | N | 0.156 | neutral | N | 0.416910772 | None | None | N |
I/M | 0.222 | likely_benign | 0.2302 | benign | -0.872 | Destabilizing | 0.097 | N | 0.621 | neutral | N | 0.450021927 | None | None | N |
I/N | 0.9565 | likely_pathogenic | 0.9716 | pathogenic | -1.606 | Destabilizing | 0.637 | D | 0.767 | deleterious | None | None | None | None | N |
I/P | 0.9826 | likely_pathogenic | 0.9888 | pathogenic | -1.494 | Destabilizing | 0.637 | D | 0.772 | deleterious | None | None | None | None | N |
I/Q | 0.9735 | likely_pathogenic | 0.9834 | pathogenic | -1.711 | Destabilizing | 0.637 | D | 0.747 | deleterious | None | None | None | None | N |
I/R | 0.9338 | likely_pathogenic | 0.9631 | pathogenic | -1.118 | Destabilizing | 0.303 | N | 0.771 | deleterious | N | 0.47597012 | None | None | N |
I/S | 0.9081 | likely_pathogenic | 0.9337 | pathogenic | -2.301 | Highly Destabilizing | 0.075 | N | 0.682 | prob.neutral | None | None | None | None | N |
I/T | 0.5418 | ambiguous | 0.6432 | pathogenic | -2.095 | Highly Destabilizing | 0.058 | N | 0.611 | neutral | N | 0.472846359 | None | None | N |
I/V | 0.106 | likely_benign | 0.1097 | benign | -1.494 | Destabilizing | None | N | 0.173 | neutral | N | 0.439690125 | None | None | N |
I/W | 0.966 | likely_pathogenic | 0.9804 | pathogenic | -1.699 | Destabilizing | 0.869 | D | 0.741 | deleterious | None | None | None | None | N |
I/Y | 0.9061 | likely_pathogenic | 0.9358 | pathogenic | -1.498 | Destabilizing | 0.366 | N | 0.693 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.