Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13898 | 41917;41918;41919 | chr2:178635632;178635631;178635630 | chr2:179500359;179500358;179500357 |
N2AB | 12257 | 36994;36995;36996 | chr2:178635632;178635631;178635630 | chr2:179500359;179500358;179500357 |
N2A | 11330 | 34213;34214;34215 | chr2:178635632;178635631;178635630 | chr2:179500359;179500358;179500357 |
N2B | 4833 | 14722;14723;14724 | chr2:178635632;178635631;178635630 | chr2:179500359;179500358;179500357 |
Novex-1 | 4958 | 15097;15098;15099 | chr2:178635632;178635631;178635630 | chr2:179500359;179500358;179500357 |
Novex-2 | 5025 | 15298;15299;15300 | chr2:178635632;178635631;178635630 | chr2:179500359;179500358;179500357 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/G | None | None | 0.181 | N | 0.264 | 0.09 | 0.326074293725 | gnomAD-4.0.0 | 1.6384E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.82056E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6577 | likely_pathogenic | 0.6861 | pathogenic | -0.754 | Destabilizing | 0.887 | D | 0.315 | neutral | None | None | None | None | N |
A/D | 0.7555 | likely_pathogenic | 0.8634 | pathogenic | -0.79 | Destabilizing | 0.507 | D | 0.486 | neutral | None | None | None | None | N |
A/E | 0.61 | likely_pathogenic | 0.7502 | pathogenic | -0.937 | Destabilizing | 0.181 | N | 0.502 | neutral | N | 0.446763097 | None | None | N |
A/F | 0.4408 | ambiguous | 0.5263 | ambiguous | -0.867 | Destabilizing | 0.001 | N | 0.251 | neutral | None | None | None | None | N |
A/G | 0.2796 | likely_benign | 0.3582 | ambiguous | -0.294 | Destabilizing | 0.181 | N | 0.264 | neutral | N | 0.45338285 | None | None | N |
A/H | 0.6979 | likely_pathogenic | 0.7693 | pathogenic | -0.308 | Destabilizing | 0.507 | D | 0.423 | neutral | None | None | None | None | N |
A/I | 0.3528 | ambiguous | 0.4401 | ambiguous | -0.33 | Destabilizing | 0.128 | N | 0.4 | neutral | None | None | None | None | N |
A/K | 0.7338 | likely_pathogenic | 0.8405 | pathogenic | -0.764 | Destabilizing | 0.227 | N | 0.497 | neutral | None | None | None | None | N |
A/L | 0.2797 | likely_benign | 0.3272 | benign | -0.33 | Destabilizing | 0.057 | N | 0.367 | neutral | None | None | None | None | N |
A/M | 0.3937 | ambiguous | 0.4683 | ambiguous | -0.505 | Destabilizing | 0.676 | D | 0.384 | neutral | None | None | None | None | N |
A/N | 0.5777 | likely_pathogenic | 0.6671 | pathogenic | -0.409 | Destabilizing | 0.507 | D | 0.501 | neutral | None | None | None | None | N |
A/P | 0.7666 | likely_pathogenic | 0.8614 | pathogenic | -0.273 | Destabilizing | 0.612 | D | 0.471 | neutral | N | 0.452720731 | None | None | N |
A/Q | 0.5353 | ambiguous | 0.6274 | pathogenic | -0.697 | Destabilizing | 0.676 | D | 0.458 | neutral | None | None | None | None | N |
A/R | 0.6309 | likely_pathogenic | 0.7385 | pathogenic | -0.258 | Destabilizing | 0.507 | D | 0.473 | neutral | None | None | None | None | N |
A/S | 0.1316 | likely_benign | 0.151 | benign | -0.542 | Destabilizing | 0.1 | N | 0.274 | neutral | N | 0.424867333 | None | None | N |
A/T | 0.163 | likely_benign | 0.2119 | benign | -0.621 | Destabilizing | 0.001 | N | 0.184 | neutral | N | 0.44129151 | None | None | N |
A/V | 0.1748 | likely_benign | 0.2256 | benign | -0.273 | Destabilizing | None | N | 0.106 | neutral | N | 0.430765861 | None | None | N |
A/W | 0.8792 | likely_pathogenic | 0.9168 | pathogenic | -1.017 | Destabilizing | 0.887 | D | 0.448 | neutral | None | None | None | None | N |
A/Y | 0.6551 | likely_pathogenic | 0.7229 | pathogenic | -0.682 | Destabilizing | 0.004 | N | 0.32 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.