Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13901 | 41926;41927;41928 | chr2:178635623;178635622;178635621 | chr2:179500350;179500349;179500348 |
N2AB | 12260 | 37003;37004;37005 | chr2:178635623;178635622;178635621 | chr2:179500350;179500349;179500348 |
N2A | 11333 | 34222;34223;34224 | chr2:178635623;178635622;178635621 | chr2:179500350;179500349;179500348 |
N2B | 4836 | 14731;14732;14733 | chr2:178635623;178635622;178635621 | chr2:179500350;179500349;179500348 |
Novex-1 | 4961 | 15106;15107;15108 | chr2:178635623;178635622;178635621 | chr2:179500350;179500349;179500348 |
Novex-2 | 5028 | 15307;15308;15309 | chr2:178635623;178635622;178635621 | chr2:179500350;179500349;179500348 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/P | None | None | 1.0 | N | 0.683 | 0.43 | 0.322510055762 | gnomAD-4.0.0 | 4.80129E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.25001E-06 | 0 | 0 |
T/S | None | None | 0.816 | N | 0.349 | 0.195 | 0.203808441222 | gnomAD-4.0.0 | 1.64096E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.94488E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.4714 | ambiguous | 0.4451 | ambiguous | -0.567 | Destabilizing | 0.959 | D | 0.449 | neutral | N | 0.49481264 | None | None | N |
T/C | 0.899 | likely_pathogenic | 0.904 | pathogenic | -0.362 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
T/D | 0.9747 | likely_pathogenic | 0.9633 | pathogenic | -0.016 | Destabilizing | 0.998 | D | 0.632 | neutral | None | None | None | None | N |
T/E | 0.9706 | likely_pathogenic | 0.9555 | pathogenic | -0.017 | Destabilizing | 0.998 | D | 0.637 | neutral | None | None | None | None | N |
T/F | 0.938 | likely_pathogenic | 0.8956 | pathogenic | -0.705 | Destabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | N |
T/G | 0.8393 | likely_pathogenic | 0.8192 | pathogenic | -0.813 | Destabilizing | 0.993 | D | 0.601 | neutral | None | None | None | None | N |
T/H | 0.8959 | likely_pathogenic | 0.8758 | pathogenic | -1.075 | Destabilizing | 1.0 | D | 0.739 | deleterious | None | None | None | None | N |
T/I | 0.8141 | likely_pathogenic | 0.7238 | pathogenic | -0.009 | Destabilizing | 0.999 | D | 0.673 | prob.neutral | N | 0.499392542 | None | None | N |
T/K | 0.9259 | likely_pathogenic | 0.8892 | pathogenic | -0.624 | Destabilizing | 0.998 | D | 0.631 | neutral | None | None | None | None | N |
T/L | 0.613 | likely_pathogenic | 0.5084 | ambiguous | -0.009 | Destabilizing | 0.997 | D | 0.594 | neutral | None | None | None | None | N |
T/M | 0.5744 | likely_pathogenic | 0.4727 | ambiguous | 0.061 | Stabilizing | 1.0 | D | 0.692 | prob.delet. | None | None | None | None | N |
T/N | 0.7498 | likely_pathogenic | 0.6916 | pathogenic | -0.534 | Destabilizing | 0.997 | D | 0.633 | neutral | N | 0.443968219 | None | None | N |
T/P | 0.7918 | likely_pathogenic | 0.7035 | pathogenic | -0.162 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | N | 0.493168374 | None | None | N |
T/Q | 0.9239 | likely_pathogenic | 0.9017 | pathogenic | -0.616 | Destabilizing | 0.999 | D | 0.656 | prob.neutral | None | None | None | None | N |
T/R | 0.9269 | likely_pathogenic | 0.8986 | pathogenic | -0.442 | Destabilizing | 0.999 | D | 0.671 | prob.neutral | None | None | None | None | N |
T/S | 0.478 | ambiguous | 0.4717 | ambiguous | -0.765 | Destabilizing | 0.816 | D | 0.349 | neutral | N | 0.495992709 | None | None | N |
T/V | 0.6368 | likely_pathogenic | 0.5781 | pathogenic | -0.162 | Destabilizing | 0.997 | D | 0.563 | neutral | None | None | None | None | N |
T/W | 0.9903 | likely_pathogenic | 0.9839 | pathogenic | -0.728 | Destabilizing | 1.0 | D | 0.724 | deleterious | None | None | None | None | N |
T/Y | 0.9508 | likely_pathogenic | 0.9213 | pathogenic | -0.465 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.