Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13906 | 41941;41942;41943 | chr2:178635608;178635607;178635606 | chr2:179500335;179500334;179500333 |
N2AB | 12265 | 37018;37019;37020 | chr2:178635608;178635607;178635606 | chr2:179500335;179500334;179500333 |
N2A | 11338 | 34237;34238;34239 | chr2:178635608;178635607;178635606 | chr2:179500335;179500334;179500333 |
N2B | 4841 | 14746;14747;14748 | chr2:178635608;178635607;178635606 | chr2:179500335;179500334;179500333 |
Novex-1 | 4966 | 15121;15122;15123 | chr2:178635608;178635607;178635606 | chr2:179500335;179500334;179500333 |
Novex-2 | 5033 | 15322;15323;15324 | chr2:178635608;178635607;178635606 | chr2:179500335;179500334;179500333 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
W/R | None | None | 0.999 | D | 0.811 | 0.776 | 0.907460717844 | gnomAD-4.0.0 | 1.64324E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.9494E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
W/A | 0.9977 | likely_pathogenic | 0.9977 | pathogenic | -2.795 | Highly Destabilizing | 0.999 | D | 0.801 | deleterious | None | None | None | None | N |
W/C | 0.9988 | likely_pathogenic | 0.9984 | pathogenic | -1.603 | Destabilizing | 1.0 | D | 0.739 | deleterious | D | 0.640109696 | None | None | N |
W/D | 0.9998 | likely_pathogenic | 0.9997 | pathogenic | -3.413 | Highly Destabilizing | 0.999 | D | 0.81 | deleterious | None | None | None | None | N |
W/E | 0.9998 | likely_pathogenic | 0.9998 | pathogenic | -3.291 | Highly Destabilizing | 0.999 | D | 0.815 | deleterious | None | None | None | None | N |
W/F | 0.6264 | likely_pathogenic | 0.5876 | pathogenic | -1.756 | Destabilizing | 0.999 | D | 0.665 | prob.neutral | None | None | None | None | N |
W/G | 0.9927 | likely_pathogenic | 0.9914 | pathogenic | -3.036 | Highly Destabilizing | 0.999 | D | 0.705 | prob.delet. | D | 0.640109696 | None | None | N |
W/H | 0.9989 | likely_pathogenic | 0.9987 | pathogenic | -2.215 | Highly Destabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | N |
W/I | 0.9741 | likely_pathogenic | 0.9777 | pathogenic | -1.875 | Destabilizing | 0.999 | D | 0.812 | deleterious | None | None | None | None | N |
W/K | 0.9999 | likely_pathogenic | 0.9999 | pathogenic | -2.587 | Highly Destabilizing | 0.999 | D | 0.813 | deleterious | None | None | None | None | N |
W/L | 0.9485 | likely_pathogenic | 0.9566 | pathogenic | -1.875 | Destabilizing | 0.999 | D | 0.705 | prob.delet. | D | 0.640560157 | None | None | N |
W/M | 0.9923 | likely_pathogenic | 0.9929 | pathogenic | -1.367 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
W/N | 0.9997 | likely_pathogenic | 0.9996 | pathogenic | -3.373 | Highly Destabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | N |
W/P | 0.9995 | likely_pathogenic | 0.9995 | pathogenic | -2.21 | Highly Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
W/Q | 0.9999 | likely_pathogenic | 0.9999 | pathogenic | -3.135 | Highly Destabilizing | 0.999 | D | 0.784 | deleterious | None | None | None | None | N |
W/R | 0.9998 | likely_pathogenic | 0.9997 | pathogenic | -2.497 | Highly Destabilizing | 0.999 | D | 0.811 | deleterious | D | 0.640109696 | None | None | N |
W/S | 0.9985 | likely_pathogenic | 0.9983 | pathogenic | -3.433 | Highly Destabilizing | 0.999 | D | 0.813 | deleterious | D | 0.640109696 | None | None | N |
W/T | 0.9982 | likely_pathogenic | 0.998 | pathogenic | -3.235 | Highly Destabilizing | 0.999 | D | 0.781 | deleterious | None | None | None | None | N |
W/V | 0.9845 | likely_pathogenic | 0.9858 | pathogenic | -2.21 | Highly Destabilizing | 0.999 | D | 0.811 | deleterious | None | None | None | None | N |
W/Y | 0.9262 | likely_pathogenic | 0.9085 | pathogenic | -1.622 | Destabilizing | 0.999 | D | 0.636 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.