Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13908 | 41947;41948;41949 | chr2:178635602;178635601;178635600 | chr2:179500329;179500328;179500327 |
N2AB | 12267 | 37024;37025;37026 | chr2:178635602;178635601;178635600 | chr2:179500329;179500328;179500327 |
N2A | 11340 | 34243;34244;34245 | chr2:178635602;178635601;178635600 | chr2:179500329;179500328;179500327 |
N2B | 4843 | 14752;14753;14754 | chr2:178635602;178635601;178635600 | chr2:179500329;179500328;179500327 |
Novex-1 | 4968 | 15127;15128;15129 | chr2:178635602;178635601;178635600 | chr2:179500329;179500328;179500327 |
Novex-2 | 5035 | 15328;15329;15330 | chr2:178635602;178635601;178635600 | chr2:179500329;179500328;179500327 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | None | None | 0.007 | N | 0.286 | 0.112 | 0.173771789658 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.8234 | likely_pathogenic | 0.8023 | pathogenic | -0.948 | Destabilizing | 0.74 | D | 0.487 | neutral | None | None | None | None | N |
K/C | 0.8065 | likely_pathogenic | 0.8055 | pathogenic | -0.891 | Destabilizing | 0.996 | D | 0.733 | deleterious | None | None | None | None | N |
K/D | 0.9741 | likely_pathogenic | 0.9671 | pathogenic | -0.191 | Destabilizing | 0.909 | D | 0.634 | neutral | None | None | None | None | N |
K/E | 0.7531 | likely_pathogenic | 0.6949 | pathogenic | -0.034 | Destabilizing | 0.682 | D | 0.432 | neutral | D | 0.575934369 | None | None | N |
K/F | 0.9447 | likely_pathogenic | 0.9395 | pathogenic | -0.629 | Destabilizing | 0.996 | D | 0.727 | deleterious | None | None | None | None | N |
K/G | 0.9337 | likely_pathogenic | 0.9243 | pathogenic | -1.342 | Destabilizing | 0.909 | D | 0.584 | neutral | None | None | None | None | N |
K/H | 0.4801 | ambiguous | 0.4676 | ambiguous | -1.625 | Destabilizing | 0.987 | D | 0.588 | neutral | None | None | None | None | N |
K/I | 0.7393 | likely_pathogenic | 0.6836 | pathogenic | 0.096 | Stabilizing | 0.938 | D | 0.754 | deleterious | D | 0.573036806 | None | None | N |
K/L | 0.6446 | likely_pathogenic | 0.5902 | pathogenic | 0.096 | Stabilizing | 0.909 | D | 0.584 | neutral | None | None | None | None | N |
K/M | 0.585 | likely_pathogenic | 0.5437 | ambiguous | -0.036 | Destabilizing | 0.996 | D | 0.579 | neutral | None | None | None | None | N |
K/N | 0.9042 | likely_pathogenic | 0.8873 | pathogenic | -0.69 | Destabilizing | 0.883 | D | 0.605 | neutral | D | 0.575934369 | None | None | N |
K/P | 0.9924 | likely_pathogenic | 0.9908 | pathogenic | -0.223 | Destabilizing | 0.953 | D | 0.629 | neutral | None | None | None | None | N |
K/Q | 0.3569 | ambiguous | 0.3214 | benign | -0.676 | Destabilizing | 0.883 | D | 0.599 | neutral | D | 0.575206445 | None | None | N |
K/R | 0.0791 | likely_benign | 0.0778 | benign | -0.612 | Destabilizing | 0.007 | N | 0.286 | neutral | N | 0.500342548 | None | None | N |
K/S | 0.8725 | likely_pathogenic | 0.8598 | pathogenic | -1.436 | Destabilizing | 0.74 | D | 0.54 | neutral | None | None | None | None | N |
K/T | 0.7581 | likely_pathogenic | 0.7105 | pathogenic | -1.045 | Destabilizing | 0.883 | D | 0.611 | neutral | D | 0.575206445 | None | None | N |
K/V | 0.6862 | likely_pathogenic | 0.6588 | pathogenic | -0.223 | Destabilizing | 0.909 | D | 0.693 | prob.delet. | None | None | None | None | N |
K/W | 0.9085 | likely_pathogenic | 0.8949 | pathogenic | -0.472 | Destabilizing | 0.996 | D | 0.668 | prob.neutral | None | None | None | None | N |
K/Y | 0.8437 | likely_pathogenic | 0.8412 | pathogenic | -0.174 | Destabilizing | 0.984 | D | 0.706 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.