Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13911 | 41956;41957;41958 | chr2:178635593;178635592;178635591 | chr2:179500320;179500319;179500318 |
N2AB | 12270 | 37033;37034;37035 | chr2:178635593;178635592;178635591 | chr2:179500320;179500319;179500318 |
N2A | 11343 | 34252;34253;34254 | chr2:178635593;178635592;178635591 | chr2:179500320;179500319;179500318 |
N2B | 4846 | 14761;14762;14763 | chr2:178635593;178635592;178635591 | chr2:179500320;179500319;179500318 |
Novex-1 | 4971 | 15136;15137;15138 | chr2:178635593;178635592;178635591 | chr2:179500320;179500319;179500318 |
Novex-2 | 5038 | 15337;15338;15339 | chr2:178635593;178635592;178635591 | chr2:179500320;179500319;179500318 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | rs1209898521 | None | 0.003 | N | 0.123 | 0.086 | 0.12205267543 | gnomAD-4.0.0 | 6.93692E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.19523E-05 | 0 |
D/Y | rs1209898521 | None | 0.306 | N | 0.531 | 0.174 | 0.362361684037 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.94024E-04 | None | 0 | 0 | 0 | 0 | 0 |
D/Y | rs1209898521 | None | 0.306 | N | 0.531 | 0.174 | 0.362361684037 | gnomAD-4.0.0 | 6.57774E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.94024E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.3296 | likely_benign | 0.3538 | ambiguous | -0.293 | Destabilizing | 0.094 | N | 0.325 | neutral | N | 0.438912266 | None | None | N |
D/C | 0.877 | likely_pathogenic | 0.8786 | pathogenic | -0.247 | Destabilizing | 0.964 | D | 0.401 | neutral | None | None | None | None | N |
D/E | 0.1694 | likely_benign | 0.1735 | benign | -0.287 | Destabilizing | None | N | 0.085 | neutral | N | 0.413521964 | None | None | N |
D/F | 0.8663 | likely_pathogenic | 0.8862 | pathogenic | 0.052 | Stabilizing | 0.703 | D | 0.499 | neutral | None | None | None | None | N |
D/G | 0.4519 | ambiguous | 0.4861 | ambiguous | -0.52 | Destabilizing | 0.094 | N | 0.331 | neutral | N | 0.439832885 | None | None | N |
D/H | 0.5903 | likely_pathogenic | 0.6027 | pathogenic | 0.4 | Stabilizing | 0.001 | N | 0.243 | neutral | N | 0.441955121 | None | None | N |
D/I | 0.6478 | likely_pathogenic | 0.6586 | pathogenic | 0.27 | Stabilizing | 0.538 | D | 0.532 | neutral | None | None | None | None | N |
D/K | 0.6646 | likely_pathogenic | 0.6396 | pathogenic | 0.281 | Stabilizing | 0.064 | N | 0.327 | neutral | None | None | None | None | N |
D/L | 0.6739 | likely_pathogenic | 0.7025 | pathogenic | 0.27 | Stabilizing | 0.25 | N | 0.467 | neutral | None | None | None | None | N |
D/M | 0.834 | likely_pathogenic | 0.8564 | pathogenic | 0.214 | Stabilizing | 0.878 | D | 0.4 | neutral | None | None | None | None | N |
D/N | 0.2169 | likely_benign | 0.2174 | benign | -0.309 | Destabilizing | 0.003 | N | 0.123 | neutral | N | 0.444448097 | None | None | N |
D/P | 0.9753 | likely_pathogenic | 0.9797 | pathogenic | 0.105 | Stabilizing | 0.403 | N | 0.443 | neutral | None | None | None | None | N |
D/Q | 0.5091 | ambiguous | 0.5159 | ambiguous | -0.222 | Destabilizing | 0.143 | N | 0.187 | neutral | None | None | None | None | N |
D/R | 0.6844 | likely_pathogenic | 0.688 | pathogenic | 0.6 | Stabilizing | 0.25 | N | 0.43 | neutral | None | None | None | None | N |
D/S | 0.2455 | likely_benign | 0.2624 | benign | -0.385 | Destabilizing | 0.064 | N | 0.242 | neutral | None | None | None | None | N |
D/T | 0.3808 | ambiguous | 0.3831 | ambiguous | -0.19 | Destabilizing | 0.004 | N | 0.229 | neutral | None | None | None | None | N |
D/V | 0.4094 | ambiguous | 0.4285 | ambiguous | 0.105 | Stabilizing | 0.201 | N | 0.469 | neutral | N | 0.444659975 | None | None | N |
D/W | 0.9676 | likely_pathogenic | 0.9709 | pathogenic | 0.257 | Stabilizing | 0.964 | D | 0.431 | neutral | None | None | None | None | N |
D/Y | 0.5287 | ambiguous | 0.5573 | ambiguous | 0.308 | Stabilizing | 0.306 | N | 0.531 | neutral | N | 0.441955121 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.