Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13912 | 41959;41960;41961 | chr2:178635590;178635589;178635588 | chr2:179500317;179500316;179500315 |
N2AB | 12271 | 37036;37037;37038 | chr2:178635590;178635589;178635588 | chr2:179500317;179500316;179500315 |
N2A | 11344 | 34255;34256;34257 | chr2:178635590;178635589;178635588 | chr2:179500317;179500316;179500315 |
N2B | 4847 | 14764;14765;14766 | chr2:178635590;178635589;178635588 | chr2:179500317;179500316;179500315 |
Novex-1 | 4972 | 15139;15140;15141 | chr2:178635590;178635589;178635588 | chr2:179500317;179500316;179500315 |
Novex-2 | 5039 | 15340;15341;15342 | chr2:178635590;178635589;178635588 | chr2:179500317;179500316;179500315 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs779199526 | -0.78 | 0.709 | D | 0.473 | 0.124 | 0.219573609325 | gnomAD-2.1.1 | 4.59E-06 | None | None | None | None | N | None | 0 | 3.25E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3584 | ambiguous | 0.3364 | benign | -0.735 | Destabilizing | 0.016 | N | 0.403 | neutral | D | 0.534190317 | None | None | N |
E/C | 0.9701 | likely_pathogenic | 0.9673 | pathogenic | -0.478 | Destabilizing | 0.992 | D | 0.719 | prob.delet. | None | None | None | None | N |
E/D | 0.5049 | ambiguous | 0.5535 | ambiguous | -0.854 | Destabilizing | 0.709 | D | 0.473 | neutral | D | 0.538326296 | None | None | N |
E/F | 0.9634 | likely_pathogenic | 0.9669 | pathogenic | -0.069 | Destabilizing | 0.848 | D | 0.723 | deleterious | None | None | None | None | N |
E/G | 0.659 | likely_pathogenic | 0.6648 | pathogenic | -1.068 | Destabilizing | 0.546 | D | 0.501 | neutral | D | 0.539661471 | None | None | N |
E/H | 0.9262 | likely_pathogenic | 0.9278 | pathogenic | -0.038 | Destabilizing | 0.992 | D | 0.473 | neutral | None | None | None | None | N |
E/I | 0.634 | likely_pathogenic | 0.6233 | pathogenic | 0.164 | Stabilizing | 0.491 | N | 0.585 | neutral | None | None | None | None | N |
E/K | 0.5681 | likely_pathogenic | 0.5553 | ambiguous | -0.358 | Destabilizing | 0.709 | D | 0.425 | neutral | N | 0.446796766 | None | None | N |
E/L | 0.7716 | likely_pathogenic | 0.7451 | pathogenic | 0.164 | Stabilizing | 0.444 | N | 0.534 | neutral | None | None | None | None | N |
E/M | 0.764 | likely_pathogenic | 0.7486 | pathogenic | 0.358 | Stabilizing | 0.955 | D | 0.625 | neutral | None | None | None | None | N |
E/N | 0.7471 | likely_pathogenic | 0.7452 | pathogenic | -0.953 | Destabilizing | 0.972 | D | 0.464 | neutral | None | None | None | None | N |
E/P | 0.7484 | likely_pathogenic | 0.7082 | pathogenic | -0.115 | Destabilizing | 0.919 | D | 0.505 | neutral | None | None | None | None | N |
E/Q | 0.4411 | ambiguous | 0.4178 | ambiguous | -0.82 | Destabilizing | 0.963 | D | 0.485 | neutral | N | 0.495384187 | None | None | N |
E/R | 0.7697 | likely_pathogenic | 0.7611 | pathogenic | 0.048 | Stabilizing | 0.919 | D | 0.457 | neutral | None | None | None | None | N |
E/S | 0.5867 | likely_pathogenic | 0.5955 | pathogenic | -1.179 | Destabilizing | 0.444 | N | 0.391 | neutral | None | None | None | None | N |
E/T | 0.5677 | likely_pathogenic | 0.5579 | ambiguous | -0.899 | Destabilizing | 0.615 | D | 0.509 | neutral | None | None | None | None | N |
E/V | 0.4588 | ambiguous | 0.4412 | ambiguous | -0.115 | Destabilizing | 0.004 | N | 0.44 | neutral | N | 0.492128283 | None | None | N |
E/W | 0.9933 | likely_pathogenic | 0.9945 | pathogenic | 0.233 | Stabilizing | 0.992 | D | 0.691 | prob.delet. | None | None | None | None | N |
E/Y | 0.9527 | likely_pathogenic | 0.9583 | pathogenic | 0.197 | Stabilizing | 0.919 | D | 0.657 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.