Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13913 | 41962;41963;41964 | chr2:178635587;178635586;178635585 | chr2:179500314;179500313;179500312 |
N2AB | 12272 | 37039;37040;37041 | chr2:178635587;178635586;178635585 | chr2:179500314;179500313;179500312 |
N2A | 11345 | 34258;34259;34260 | chr2:178635587;178635586;178635585 | chr2:179500314;179500313;179500312 |
N2B | 4848 | 14767;14768;14769 | chr2:178635587;178635586;178635585 | chr2:179500314;179500313;179500312 |
Novex-1 | 4973 | 15142;15143;15144 | chr2:178635587;178635586;178635585 | chr2:179500314;179500313;179500312 |
Novex-2 | 5040 | 15343;15344;15345 | chr2:178635587;178635586;178635585 | chr2:179500314;179500313;179500312 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | None | None | 0.041 | N | 0.507 | 0.09 | 0.377451072189 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9864 | likely_pathogenic | 0.9896 | pathogenic | -2.194 | Highly Destabilizing | 0.385 | N | 0.611 | neutral | None | None | None | None | N |
I/C | 0.9919 | likely_pathogenic | 0.9944 | pathogenic | -1.251 | Destabilizing | 0.981 | D | 0.705 | prob.delet. | None | None | None | None | N |
I/D | 0.9969 | likely_pathogenic | 0.9971 | pathogenic | -2.379 | Highly Destabilizing | 0.931 | D | 0.821 | deleterious | None | None | None | None | N |
I/E | 0.9936 | likely_pathogenic | 0.994 | pathogenic | -2.17 | Highly Destabilizing | 0.817 | D | 0.819 | deleterious | None | None | None | None | N |
I/F | 0.6698 | likely_pathogenic | 0.7219 | pathogenic | -1.315 | Destabilizing | 0.454 | N | 0.607 | neutral | D | 0.547609603 | None | None | N |
I/G | 0.997 | likely_pathogenic | 0.9974 | pathogenic | -2.703 | Highly Destabilizing | 0.817 | D | 0.819 | deleterious | None | None | None | None | N |
I/H | 0.9909 | likely_pathogenic | 0.992 | pathogenic | -2.077 | Highly Destabilizing | 0.981 | D | 0.805 | deleterious | None | None | None | None | N |
I/K | 0.9878 | likely_pathogenic | 0.9895 | pathogenic | -1.622 | Destabilizing | 0.817 | D | 0.819 | deleterious | None | None | None | None | N |
I/L | 0.2355 | likely_benign | 0.3337 | benign | -0.741 | Destabilizing | 0.001 | N | 0.254 | neutral | N | 0.434597695 | None | None | N |
I/M | 0.3856 | ambiguous | 0.4572 | ambiguous | -0.559 | Destabilizing | 0.624 | D | 0.58 | neutral | D | 0.548885324 | None | None | N |
I/N | 0.9656 | likely_pathogenic | 0.9621 | pathogenic | -1.903 | Destabilizing | 0.911 | D | 0.826 | deleterious | D | 0.549638229 | None | None | N |
I/P | 0.9959 | likely_pathogenic | 0.9963 | pathogenic | -1.205 | Destabilizing | 0.931 | D | 0.821 | deleterious | None | None | None | None | N |
I/Q | 0.9901 | likely_pathogenic | 0.9916 | pathogenic | -1.802 | Destabilizing | 0.931 | D | 0.811 | deleterious | None | None | None | None | N |
I/R | 0.9864 | likely_pathogenic | 0.9886 | pathogenic | -1.341 | Destabilizing | 0.817 | D | 0.834 | deleterious | None | None | None | None | N |
I/S | 0.9866 | likely_pathogenic | 0.9873 | pathogenic | -2.56 | Highly Destabilizing | 0.771 | D | 0.713 | prob.delet. | D | 0.548885324 | None | None | N |
I/T | 0.986 | likely_pathogenic | 0.9877 | pathogenic | -2.209 | Highly Destabilizing | 0.321 | N | 0.714 | prob.delet. | D | 0.548885324 | None | None | N |
I/V | 0.4525 | ambiguous | 0.5174 | ambiguous | -1.205 | Destabilizing | 0.041 | N | 0.507 | neutral | N | 0.475171451 | None | None | N |
I/W | 0.9879 | likely_pathogenic | 0.9911 | pathogenic | -1.678 | Destabilizing | 0.981 | D | 0.761 | deleterious | None | None | None | None | N |
I/Y | 0.9408 | likely_pathogenic | 0.9468 | pathogenic | -1.336 | Destabilizing | 0.817 | D | 0.695 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.