Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13916 | 41971;41972;41973 | chr2:178635578;178635577;178635576 | chr2:179500305;179500304;179500303 |
N2AB | 12275 | 37048;37049;37050 | chr2:178635578;178635577;178635576 | chr2:179500305;179500304;179500303 |
N2A | 11348 | 34267;34268;34269 | chr2:178635578;178635577;178635576 | chr2:179500305;179500304;179500303 |
N2B | 4851 | 14776;14777;14778 | chr2:178635578;178635577;178635576 | chr2:179500305;179500304;179500303 |
Novex-1 | 4976 | 15151;15152;15153 | chr2:178635578;178635577;178635576 | chr2:179500305;179500304;179500303 |
Novex-2 | 5043 | 15352;15353;15354 | chr2:178635578;178635577;178635576 | chr2:179500305;179500304;179500303 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.034 | N | 0.312 | 0.021 | 0.0806252709748 | gnomAD-4.0.0 | 1.64186E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 1.92589E-05 | 0 | 0 | 0 | 0 |
E/K | None | None | 0.132 | N | 0.334 | 0.229 | 0.173771789658 | gnomAD-4.0.0 | 6.93514E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.0831E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2002 | likely_benign | 0.1991 | benign | -0.041 | Destabilizing | 0.919 | D | 0.559 | neutral | N | 0.476357861 | None | None | I |
E/C | 0.914 | likely_pathogenic | 0.92 | pathogenic | -0.202 | Destabilizing | 0.999 | D | 0.721 | deleterious | None | None | None | None | I |
E/D | 0.1802 | likely_benign | 0.2062 | benign | -0.225 | Destabilizing | 0.034 | N | 0.312 | neutral | N | 0.446322138 | None | None | I |
E/F | 0.7831 | likely_pathogenic | 0.7847 | pathogenic | -0.12 | Destabilizing | 0.997 | D | 0.555 | neutral | None | None | None | None | I |
E/G | 0.2667 | likely_benign | 0.2558 | benign | -0.153 | Destabilizing | 0.919 | D | 0.454 | neutral | N | 0.428188785 | None | None | I |
E/H | 0.71 | likely_pathogenic | 0.6975 | pathogenic | 0.473 | Stabilizing | 0.997 | D | 0.479 | neutral | None | None | None | None | I |
E/I | 0.3717 | ambiguous | 0.3743 | ambiguous | 0.198 | Stabilizing | 0.997 | D | 0.578 | neutral | None | None | None | None | I |
E/K | 0.2894 | likely_benign | 0.2454 | benign | 0.318 | Stabilizing | 0.132 | N | 0.334 | neutral | N | 0.448136185 | None | None | I |
E/L | 0.4609 | ambiguous | 0.4814 | ambiguous | 0.198 | Stabilizing | 0.991 | D | 0.533 | neutral | None | None | None | None | I |
E/M | 0.5105 | ambiguous | 0.5058 | ambiguous | -0.035 | Destabilizing | 0.999 | D | 0.526 | neutral | None | None | None | None | I |
E/N | 0.3834 | ambiguous | 0.3903 | ambiguous | 0.195 | Stabilizing | 0.938 | D | 0.582 | neutral | None | None | None | None | I |
E/P | 0.7749 | likely_pathogenic | 0.8209 | pathogenic | 0.136 | Stabilizing | 0.997 | D | 0.551 | neutral | None | None | None | None | I |
E/Q | 0.2271 | likely_benign | 0.2165 | benign | 0.194 | Stabilizing | 0.919 | D | 0.565 | neutral | N | 0.479591501 | None | None | I |
E/R | 0.5231 | ambiguous | 0.4856 | ambiguous | 0.561 | Stabilizing | 0.883 | D | 0.552 | neutral | None | None | None | None | I |
E/S | 0.2906 | likely_benign | 0.2898 | benign | 0.015 | Stabilizing | 0.938 | D | 0.56 | neutral | None | None | None | None | I |
E/T | 0.263 | likely_benign | 0.2606 | benign | 0.109 | Stabilizing | 0.968 | D | 0.522 | neutral | None | None | None | None | I |
E/V | 0.2304 | likely_benign | 0.2272 | benign | 0.136 | Stabilizing | 0.988 | D | 0.445 | neutral | N | 0.451650714 | None | None | I |
E/W | 0.958 | likely_pathogenic | 0.9584 | pathogenic | -0.087 | Destabilizing | 0.999 | D | 0.729 | deleterious | None | None | None | None | I |
E/Y | 0.7418 | likely_pathogenic | 0.7468 | pathogenic | 0.097 | Stabilizing | 0.997 | D | 0.502 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.