Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13919 | 41980;41981;41982 | chr2:178635569;178635568;178635567 | chr2:179500296;179500295;179500294 |
N2AB | 12278 | 37057;37058;37059 | chr2:178635569;178635568;178635567 | chr2:179500296;179500295;179500294 |
N2A | 11351 | 34276;34277;34278 | chr2:178635569;178635568;178635567 | chr2:179500296;179500295;179500294 |
N2B | 4854 | 14785;14786;14787 | chr2:178635569;178635568;178635567 | chr2:179500296;179500295;179500294 |
Novex-1 | 4979 | 15160;15161;15162 | chr2:178635569;178635568;178635567 | chr2:179500296;179500295;179500294 |
Novex-2 | 5046 | 15361;15362;15363 | chr2:178635569;178635568;178635567 | chr2:179500296;179500295;179500294 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | rs2060334191 | None | 0.457 | N | 0.539 | 0.195 | 0.185906805712 | gnomAD-4.0.0 | 6.56463E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 1.12816E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.3256 | likely_benign | 0.351 | ambiguous | 0.02 | Stabilizing | 0.297 | N | 0.448 | neutral | N | 0.489326599 | None | None | I |
D/C | 0.8616 | likely_pathogenic | 0.8944 | pathogenic | -0.087 | Destabilizing | 0.989 | D | 0.759 | deleterious | None | None | None | None | I |
D/E | 0.1732 | likely_benign | 0.1977 | benign | -0.294 | Destabilizing | 0.003 | N | 0.381 | neutral | N | 0.446624253 | None | None | I |
D/F | 0.8594 | likely_pathogenic | 0.8827 | pathogenic | -0.14 | Destabilizing | 0.989 | D | 0.654 | prob.neutral | None | None | None | None | I |
D/G | 0.314 | likely_benign | 0.32 | benign | -0.073 | Destabilizing | 0.457 | N | 0.539 | neutral | N | 0.429527929 | None | None | I |
D/H | 0.6016 | likely_pathogenic | 0.6131 | pathogenic | 0.436 | Stabilizing | 0.958 | D | 0.476 | neutral | N | 0.493859092 | None | None | I |
D/I | 0.6907 | likely_pathogenic | 0.7382 | pathogenic | 0.194 | Stabilizing | 0.888 | D | 0.701 | prob.delet. | None | None | None | None | I |
D/K | 0.6779 | likely_pathogenic | 0.6966 | pathogenic | 0.407 | Stabilizing | 0.359 | N | 0.523 | neutral | None | None | None | None | I |
D/L | 0.6646 | likely_pathogenic | 0.7168 | pathogenic | 0.194 | Stabilizing | 0.797 | D | 0.725 | deleterious | None | None | None | None | I |
D/M | 0.8474 | likely_pathogenic | 0.8955 | pathogenic | 0.045 | Stabilizing | 0.989 | D | 0.722 | deleterious | None | None | None | None | I |
D/N | 0.1897 | likely_benign | 0.1958 | benign | 0.27 | Stabilizing | 0.025 | N | 0.398 | neutral | N | 0.449769997 | None | None | I |
D/P | 0.7689 | likely_pathogenic | 0.787 | pathogenic | 0.154 | Stabilizing | 0.888 | D | 0.524 | neutral | None | None | None | None | I |
D/Q | 0.5646 | likely_pathogenic | 0.5964 | pathogenic | 0.254 | Stabilizing | 0.662 | D | 0.587 | neutral | None | None | None | None | I |
D/R | 0.7346 | likely_pathogenic | 0.7448 | pathogenic | 0.592 | Stabilizing | 0.797 | D | 0.641 | neutral | None | None | None | None | I |
D/S | 0.2309 | likely_benign | 0.2429 | benign | 0.153 | Stabilizing | 0.359 | N | 0.51 | neutral | None | None | None | None | I |
D/T | 0.4798 | ambiguous | 0.518 | ambiguous | 0.229 | Stabilizing | 0.797 | D | 0.535 | neutral | None | None | None | None | I |
D/V | 0.5269 | ambiguous | 0.5638 | ambiguous | 0.154 | Stabilizing | 0.747 | D | 0.723 | deleterious | N | 0.432865354 | None | None | I |
D/W | 0.9629 | likely_pathogenic | 0.9711 | pathogenic | -0.124 | Destabilizing | 0.989 | D | 0.739 | deleterious | None | None | None | None | I |
D/Y | 0.5655 | likely_pathogenic | 0.5707 | pathogenic | 0.076 | Stabilizing | 0.986 | D | 0.654 | prob.neutral | N | 0.493642758 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.