Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13920 | 41983;41984;41985 | chr2:178635566;178635565;178635564 | chr2:179500293;179500292;179500291 |
N2AB | 12279 | 37060;37061;37062 | chr2:178635566;178635565;178635564 | chr2:179500293;179500292;179500291 |
N2A | 11352 | 34279;34280;34281 | chr2:178635566;178635565;178635564 | chr2:179500293;179500292;179500291 |
N2B | 4855 | 14788;14789;14790 | chr2:178635566;178635565;178635564 | chr2:179500293;179500292;179500291 |
Novex-1 | 4980 | 15163;15164;15165 | chr2:178635566;178635565;178635564 | chr2:179500293;179500292;179500291 |
Novex-2 | 5047 | 15364;15365;15366 | chr2:178635566;178635565;178635564 | chr2:179500293;179500292;179500291 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | None | None | 0.999 | D | 0.724 | 0.355 | 0.215109475489 | gnomAD-4.0.0 | 6.93226E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.08102E-07 | 0 | 0 |
K/R | rs751156425 | 0.016 | 0.997 | N | 0.637 | 0.194 | 0.219573609325 | gnomAD-2.1.1 | 9.15E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 7.25E-05 | None | 0 | 0 | 0 |
K/R | rs751156425 | 0.016 | 0.997 | N | 0.637 | 0.194 | 0.219573609325 | gnomAD-4.0.0 | 3.281E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.96824E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9009 | likely_pathogenic | 0.8953 | pathogenic | -0.194 | Destabilizing | 0.998 | D | 0.755 | deleterious | None | None | None | None | N |
K/C | 0.9589 | likely_pathogenic | 0.966 | pathogenic | -0.074 | Destabilizing | 1.0 | D | 0.701 | prob.delet. | None | None | None | None | N |
K/D | 0.947 | likely_pathogenic | 0.9451 | pathogenic | -0.129 | Destabilizing | 0.999 | D | 0.772 | deleterious | None | None | None | None | N |
K/E | 0.7906 | likely_pathogenic | 0.7578 | pathogenic | -0.085 | Destabilizing | 0.997 | D | 0.707 | prob.delet. | D | 0.540023526 | None | None | N |
K/F | 0.9796 | likely_pathogenic | 0.977 | pathogenic | -0.209 | Destabilizing | 1.0 | D | 0.72 | deleterious | None | None | None | None | N |
K/G | 0.9446 | likely_pathogenic | 0.9489 | pathogenic | -0.493 | Destabilizing | 0.999 | D | 0.732 | deleterious | None | None | None | None | N |
K/H | 0.6714 | likely_pathogenic | 0.6802 | pathogenic | -1.016 | Destabilizing | 1.0 | D | 0.669 | prob.neutral | None | None | None | None | N |
K/I | 0.8661 | likely_pathogenic | 0.845 | pathogenic | 0.544 | Stabilizing | 0.999 | D | 0.743 | deleterious | None | None | None | None | N |
K/L | 0.8477 | likely_pathogenic | 0.8381 | pathogenic | 0.544 | Stabilizing | 0.999 | D | 0.732 | deleterious | None | None | None | None | N |
K/M | 0.7729 | likely_pathogenic | 0.7621 | pathogenic | 0.607 | Stabilizing | 1.0 | D | 0.667 | prob.neutral | N | 0.502226706 | None | None | N |
K/N | 0.8851 | likely_pathogenic | 0.875 | pathogenic | 0.029 | Stabilizing | 0.999 | D | 0.724 | deleterious | D | 0.5375323 | None | None | N |
K/P | 0.993 | likely_pathogenic | 0.9926 | pathogenic | 0.329 | Stabilizing | 0.999 | D | 0.729 | deleterious | None | None | None | None | N |
K/Q | 0.5278 | ambiguous | 0.522 | ambiguous | -0.164 | Destabilizing | 0.999 | D | 0.724 | deleterious | D | 0.540208253 | None | None | N |
K/R | 0.1391 | likely_benign | 0.1502 | benign | -0.319 | Destabilizing | 0.997 | D | 0.637 | neutral | N | 0.43146681 | None | None | N |
K/S | 0.9246 | likely_pathogenic | 0.9226 | pathogenic | -0.508 | Destabilizing | 0.998 | D | 0.731 | deleterious | None | None | None | None | N |
K/T | 0.6957 | likely_pathogenic | 0.6792 | pathogenic | -0.29 | Destabilizing | 0.999 | D | 0.779 | deleterious | D | 0.539137776 | None | None | N |
K/V | 0.8428 | likely_pathogenic | 0.8387 | pathogenic | 0.329 | Stabilizing | 0.999 | D | 0.701 | prob.delet. | None | None | None | None | N |
K/W | 0.9807 | likely_pathogenic | 0.9809 | pathogenic | -0.153 | Destabilizing | 1.0 | D | 0.671 | prob.neutral | None | None | None | None | N |
K/Y | 0.936 | likely_pathogenic | 0.9349 | pathogenic | 0.183 | Stabilizing | 1.0 | D | 0.706 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.