Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13925 | 41998;41999;42000 | chr2:178635551;178635550;178635549 | chr2:179500278;179500277;179500276 |
N2AB | 12284 | 37075;37076;37077 | chr2:178635551;178635550;178635549 | chr2:179500278;179500277;179500276 |
N2A | 11357 | 34294;34295;34296 | chr2:178635551;178635550;178635549 | chr2:179500278;179500277;179500276 |
N2B | 4860 | 14803;14804;14805 | chr2:178635551;178635550;178635549 | chr2:179500278;179500277;179500276 |
Novex-1 | 4985 | 15178;15179;15180 | chr2:178635551;178635550;178635549 | chr2:179500278;179500277;179500276 |
Novex-2 | 5052 | 15379;15380;15381 | chr2:178635551;178635550;178635549 | chr2:179500278;179500277;179500276 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | None | None | 0.058 | N | 0.451 | 0.186 | 0.335414705075 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
R/T | None | None | 0.058 | N | 0.447 | 0.065 | 0.229264304666 | gnomAD-4.0.0 | 6.92981E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.67493E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.6135 | likely_pathogenic | 0.6495 | pathogenic | -0.25 | Destabilizing | 0.016 | N | 0.391 | neutral | None | None | None | None | N |
R/C | 0.3417 | ambiguous | 0.3476 | ambiguous | -0.378 | Destabilizing | 0.869 | D | 0.411 | neutral | None | None | None | None | N |
R/D | 0.8831 | likely_pathogenic | 0.893 | pathogenic | -0.014 | Destabilizing | 0.075 | N | 0.389 | neutral | None | None | None | None | N |
R/E | 0.5506 | ambiguous | 0.5408 | ambiguous | 0.086 | Stabilizing | 0.016 | N | 0.357 | neutral | None | None | None | None | N |
R/F | 0.7023 | likely_pathogenic | 0.7262 | pathogenic | -0.344 | Destabilizing | 0.637 | D | 0.489 | neutral | None | None | None | None | N |
R/G | 0.5238 | ambiguous | 0.5691 | pathogenic | -0.498 | Destabilizing | 0.058 | N | 0.451 | neutral | N | 0.441698189 | None | None | N |
R/H | 0.1421 | likely_benign | 0.139 | benign | -1.01 | Destabilizing | 0.366 | N | 0.375 | neutral | None | None | None | None | N |
R/I | 0.4598 | ambiguous | 0.4468 | ambiguous | 0.386 | Stabilizing | 0.303 | N | 0.546 | neutral | N | 0.401905369 | None | None | N |
R/K | 0.0708 | likely_benign | 0.0712 | benign | -0.236 | Destabilizing | None | N | 0.111 | neutral | N | 0.322757743 | None | None | N |
R/L | 0.3936 | ambiguous | 0.409 | ambiguous | 0.386 | Stabilizing | 0.075 | N | 0.451 | neutral | None | None | None | None | N |
R/M | 0.4093 | ambiguous | 0.4214 | ambiguous | -0.078 | Destabilizing | 0.637 | D | 0.415 | neutral | None | None | None | None | N |
R/N | 0.7645 | likely_pathogenic | 0.7789 | pathogenic | -0.005 | Destabilizing | 0.075 | N | 0.333 | neutral | None | None | None | None | N |
R/P | 0.8622 | likely_pathogenic | 0.9094 | pathogenic | 0.196 | Stabilizing | 0.141 | N | 0.45 | neutral | None | None | None | None | N |
R/Q | 0.1475 | likely_benign | 0.1397 | benign | -0.087 | Destabilizing | 0.039 | N | 0.371 | neutral | None | None | None | None | N |
R/S | 0.7039 | likely_pathogenic | 0.7208 | pathogenic | -0.506 | Destabilizing | 0.012 | N | 0.413 | neutral | N | 0.420925081 | None | None | N |
R/T | 0.4225 | ambiguous | 0.4186 | ambiguous | -0.24 | Destabilizing | 0.058 | N | 0.447 | neutral | N | 0.441515675 | None | None | N |
R/V | 0.5167 | ambiguous | 0.526 | ambiguous | 0.196 | Stabilizing | 0.075 | N | 0.514 | neutral | None | None | None | None | N |
R/W | 0.2831 | likely_benign | 0.2768 | benign | -0.277 | Destabilizing | 0.869 | D | 0.443 | neutral | None | None | None | None | N |
R/Y | 0.5747 | likely_pathogenic | 0.5853 | pathogenic | 0.11 | Stabilizing | 0.637 | D | 0.505 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.