Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13926 | 42001;42002;42003 | chr2:178635548;178635547;178635546 | chr2:179500275;179500274;179500273 |
N2AB | 12285 | 37078;37079;37080 | chr2:178635548;178635547;178635546 | chr2:179500275;179500274;179500273 |
N2A | 11358 | 34297;34298;34299 | chr2:178635548;178635547;178635546 | chr2:179500275;179500274;179500273 |
N2B | 4861 | 14806;14807;14808 | chr2:178635548;178635547;178635546 | chr2:179500275;179500274;179500273 |
Novex-1 | 4986 | 15181;15182;15183 | chr2:178635548;178635547;178635546 | chr2:179500275;179500274;179500273 |
Novex-2 | 5053 | 15382;15383;15384 | chr2:178635548;178635547;178635546 | chr2:179500275;179500274;179500273 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | None | None | 0.189 | N | 0.51 | 0.27 | 0.188950314367 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
D/N | rs2060332594 | None | 0.449 | N | 0.558 | 0.247 | 0.195762928549 | gnomAD-4.0.0 | 2.56338E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.35837E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.2377 | likely_benign | 0.2486 | benign | -0.253 | Destabilizing | 0.104 | N | 0.468 | neutral | N | 0.509779553 | None | None | N |
D/C | 0.7788 | likely_pathogenic | 0.7973 | pathogenic | -0.114 | Destabilizing | 0.962 | D | 0.59 | neutral | None | None | None | None | N |
D/E | 0.1015 | likely_benign | 0.1101 | benign | -0.18 | Destabilizing | None | N | 0.251 | neutral | N | 0.444509038 | None | None | N |
D/F | 0.7264 | likely_pathogenic | 0.7547 | pathogenic | -0.14 | Destabilizing | 0.962 | D | 0.603 | neutral | None | None | None | None | N |
D/G | 0.3454 | ambiguous | 0.3553 | ambiguous | -0.445 | Destabilizing | 0.189 | N | 0.51 | neutral | N | 0.507833111 | None | None | N |
D/H | 0.449 | ambiguous | 0.4387 | ambiguous | 0.184 | Stabilizing | 0.862 | D | 0.514 | neutral | N | 0.511635527 | None | None | N |
D/I | 0.4235 | ambiguous | 0.4674 | ambiguous | 0.204 | Stabilizing | 0.687 | D | 0.625 | neutral | None | None | None | None | N |
D/K | 0.4197 | ambiguous | 0.4175 | ambiguous | 0.164 | Stabilizing | 0.134 | N | 0.507 | neutral | None | None | None | None | N |
D/L | 0.5288 | ambiguous | 0.5717 | pathogenic | 0.204 | Stabilizing | 0.519 | D | 0.645 | neutral | None | None | None | None | N |
D/M | 0.6478 | likely_pathogenic | 0.7007 | pathogenic | 0.205 | Stabilizing | 0.962 | D | 0.637 | neutral | None | None | None | None | N |
D/N | 0.1606 | likely_benign | 0.1581 | benign | -0.043 | Destabilizing | 0.449 | N | 0.558 | neutral | N | 0.50280466 | None | None | N |
D/P | 0.94 | likely_pathogenic | 0.9475 | pathogenic | 0.073 | Stabilizing | 0.687 | D | 0.535 | neutral | None | None | None | None | N |
D/Q | 0.3381 | likely_benign | 0.3455 | ambiguous | -0.004 | Destabilizing | 0.351 | N | 0.553 | neutral | None | None | None | None | N |
D/R | 0.534 | ambiguous | 0.514 | ambiguous | 0.448 | Stabilizing | 0.351 | N | 0.538 | neutral | None | None | None | None | N |
D/S | 0.1793 | likely_benign | 0.18 | benign | -0.209 | Destabilizing | 0.134 | N | 0.487 | neutral | None | None | None | None | N |
D/T | 0.3013 | likely_benign | 0.34 | benign | -0.06 | Destabilizing | 0.519 | D | 0.55 | neutral | None | None | None | None | N |
D/V | 0.2448 | likely_benign | 0.2749 | benign | 0.073 | Stabilizing | 0.449 | N | 0.664 | prob.neutral | N | 0.442347604 | None | None | N |
D/W | 0.9163 | likely_pathogenic | 0.9195 | pathogenic | -0.012 | Destabilizing | 0.962 | D | 0.583 | neutral | None | None | None | None | N |
D/Y | 0.3834 | ambiguous | 0.3731 | ambiguous | 0.093 | Stabilizing | 0.95 | D | 0.604 | neutral | N | 0.51183731 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.