Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13936 | 42031;42032;42033 | chr2:178635518;178635517;178635516 | chr2:179500245;179500244;179500243 |
N2AB | 12295 | 37108;37109;37110 | chr2:178635518;178635517;178635516 | chr2:179500245;179500244;179500243 |
N2A | 11368 | 34327;34328;34329 | chr2:178635518;178635517;178635516 | chr2:179500245;179500244;179500243 |
N2B | 4871 | 14836;14837;14838 | chr2:178635518;178635517;178635516 | chr2:179500245;179500244;179500243 |
Novex-1 | 4996 | 15211;15212;15213 | chr2:178635518;178635517;178635516 | chr2:179500245;179500244;179500243 |
Novex-2 | 5063 | 15412;15413;15414 | chr2:178635518;178635517;178635516 | chr2:179500245;179500244;179500243 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/H | None | None | 1.0 | D | 0.567 | 0.346 | 0.223847106136 | gnomAD-4.0.0 | 2.07122E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.71602E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.6753 | likely_pathogenic | 0.7099 | pathogenic | -0.481 | Destabilizing | 0.993 | D | 0.443 | neutral | None | None | None | None | N |
N/C | 0.8019 | likely_pathogenic | 0.8595 | pathogenic | 0.399 | Stabilizing | 1.0 | D | 0.587 | neutral | None | None | None | None | N |
N/D | 0.2857 | likely_benign | 0.3107 | benign | -0.303 | Destabilizing | 0.996 | D | 0.415 | neutral | D | 0.532252729 | None | None | N |
N/E | 0.7514 | likely_pathogenic | 0.7472 | pathogenic | -0.307 | Destabilizing | 0.993 | D | 0.437 | neutral | None | None | None | None | N |
N/F | 0.8785 | likely_pathogenic | 0.8887 | pathogenic | -0.669 | Destabilizing | 1.0 | D | 0.62 | neutral | None | None | None | None | N |
N/G | 0.5766 | likely_pathogenic | 0.632 | pathogenic | -0.714 | Destabilizing | 0.997 | D | 0.4 | neutral | None | None | None | None | N |
N/H | 0.336 | likely_benign | 0.373 | ambiguous | -0.743 | Destabilizing | 1.0 | D | 0.567 | neutral | D | 0.540677393 | None | None | N |
N/I | 0.8549 | likely_pathogenic | 0.8601 | pathogenic | 0.061 | Stabilizing | 1.0 | D | 0.651 | prob.neutral | D | 0.542703199 | None | None | N |
N/K | 0.7988 | likely_pathogenic | 0.7893 | pathogenic | -0.061 | Destabilizing | 0.603 | D | 0.343 | neutral | N | 0.45153498 | None | None | N |
N/L | 0.7486 | likely_pathogenic | 0.7622 | pathogenic | 0.061 | Stabilizing | 0.999 | D | 0.573 | neutral | None | None | None | None | N |
N/M | 0.7531 | likely_pathogenic | 0.7783 | pathogenic | 0.644 | Stabilizing | 1.0 | D | 0.528 | neutral | None | None | None | None | N |
N/P | 0.9824 | likely_pathogenic | 0.9822 | pathogenic | -0.091 | Destabilizing | 1.0 | D | 0.523 | neutral | None | None | None | None | N |
N/Q | 0.7213 | likely_pathogenic | 0.7377 | pathogenic | -0.593 | Destabilizing | 0.998 | D | 0.579 | neutral | None | None | None | None | N |
N/R | 0.8445 | likely_pathogenic | 0.8455 | pathogenic | 0.021 | Stabilizing | 0.996 | D | 0.527 | neutral | None | None | None | None | N |
N/S | 0.2751 | likely_benign | 0.3256 | benign | -0.35 | Destabilizing | 0.991 | D | 0.397 | neutral | D | 0.530658889 | None | None | N |
N/T | 0.5615 | ambiguous | 0.5848 | pathogenic | -0.201 | Destabilizing | 0.996 | D | 0.484 | neutral | D | 0.540181439 | None | None | N |
N/V | 0.8091 | likely_pathogenic | 0.824 | pathogenic | -0.091 | Destabilizing | 0.999 | D | 0.646 | neutral | None | None | None | None | N |
N/W | 0.9603 | likely_pathogenic | 0.97 | pathogenic | -0.572 | Destabilizing | 1.0 | D | 0.513 | neutral | None | None | None | None | N |
N/Y | 0.3871 | ambiguous | 0.4008 | ambiguous | -0.339 | Destabilizing | 1.0 | D | 0.559 | neutral | D | 0.541947881 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.