Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13940 | 42043;42044;42045 | chr2:178635506;178635505;178635504 | chr2:179500233;179500232;179500231 |
N2AB | 12299 | 37120;37121;37122 | chr2:178635506;178635505;178635504 | chr2:179500233;179500232;179500231 |
N2A | 11372 | 34339;34340;34341 | chr2:178635506;178635505;178635504 | chr2:179500233;179500232;179500231 |
N2B | 4875 | 14848;14849;14850 | chr2:178635506;178635505;178635504 | chr2:179500233;179500232;179500231 |
Novex-1 | 5000 | 15223;15224;15225 | chr2:178635506;178635505;178635504 | chr2:179500233;179500232;179500231 |
Novex-2 | 5067 | 15424;15425;15426 | chr2:178635506;178635505;178635504 | chr2:179500233;179500232;179500231 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.002 | N | 0.18 | 0.058 | 0.119812018005 | gnomAD-4.0.0 | 3.23387E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.80713E-06 | 0 | 0 |
E/Q | rs1172846357 | 0.129 | 0.791 | N | 0.44 | 0.169 | 0.183819452728 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
E/Q | rs1172846357 | 0.129 | 0.791 | N | 0.44 | 0.169 | 0.183819452728 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
E/Q | rs1172846357 | 0.129 | 0.791 | N | 0.44 | 0.169 | 0.183819452728 | gnomAD-4.0.0 | 5.61401E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.66605E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2192 | likely_benign | 0.2376 | benign | -0.215 | Destabilizing | 0.002 | N | 0.258 | neutral | N | 0.459229024 | None | None | N |
E/C | 0.9457 | likely_pathogenic | 0.9623 | pathogenic | -0.041 | Destabilizing | 0.995 | D | 0.523 | neutral | None | None | None | None | N |
E/D | 0.1169 | likely_benign | 0.1484 | benign | -0.21 | Destabilizing | 0.002 | N | 0.18 | neutral | N | 0.424420387 | None | None | N |
E/F | 0.9354 | likely_pathogenic | 0.9486 | pathogenic | -0.22 | Destabilizing | 0.946 | D | 0.535 | neutral | None | None | None | None | N |
E/G | 0.2181 | likely_benign | 0.2658 | benign | -0.37 | Destabilizing | 0.483 | N | 0.437 | neutral | N | 0.443071723 | None | None | N |
E/H | 0.7538 | likely_pathogenic | 0.7855 | pathogenic | 0.185 | Stabilizing | 0.982 | D | 0.318 | neutral | None | None | None | None | N |
E/I | 0.7095 | likely_pathogenic | 0.7323 | pathogenic | 0.146 | Stabilizing | 0.897 | D | 0.576 | neutral | None | None | None | None | N |
E/K | 0.3856 | ambiguous | 0.3805 | ambiguous | 0.345 | Stabilizing | 0.651 | D | 0.441 | neutral | N | 0.459412465 | None | None | N |
E/L | 0.7191 | likely_pathogenic | 0.7718 | pathogenic | 0.146 | Stabilizing | 0.712 | D | 0.507 | neutral | None | None | None | None | N |
E/M | 0.7405 | likely_pathogenic | 0.7875 | pathogenic | 0.123 | Stabilizing | 0.995 | D | 0.469 | neutral | None | None | None | None | N |
E/N | 0.3683 | ambiguous | 0.4214 | ambiguous | 0.167 | Stabilizing | 0.553 | D | 0.396 | neutral | None | None | None | None | N |
E/P | 0.8329 | likely_pathogenic | 0.8648 | pathogenic | 0.045 | Stabilizing | 0.946 | D | 0.424 | neutral | None | None | None | None | N |
E/Q | 0.293 | likely_benign | 0.3111 | benign | 0.182 | Stabilizing | 0.791 | D | 0.44 | neutral | N | 0.443340622 | None | None | N |
E/R | 0.6026 | likely_pathogenic | 0.6259 | pathogenic | 0.564 | Stabilizing | 0.946 | D | 0.366 | neutral | None | None | None | None | N |
E/S | 0.2441 | likely_benign | 0.2831 | benign | -0.019 | Destabilizing | 0.338 | N | 0.372 | neutral | None | None | None | None | N |
E/T | 0.3662 | ambiguous | 0.3947 | ambiguous | 0.107 | Stabilizing | 0.712 | D | 0.323 | neutral | None | None | None | None | N |
E/V | 0.5009 | ambiguous | 0.5239 | ambiguous | 0.045 | Stabilizing | 0.483 | N | 0.437 | neutral | N | 0.445791187 | None | None | N |
E/W | 0.9658 | likely_pathogenic | 0.9735 | pathogenic | -0.135 | Destabilizing | 0.995 | D | 0.619 | neutral | None | None | None | None | N |
E/Y | 0.8726 | likely_pathogenic | 0.8902 | pathogenic | 0.009 | Stabilizing | 0.982 | D | 0.48 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.