Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13944 | 42055;42056;42057 | chr2:178635494;178635493;178635492 | chr2:179500221;179500220;179500219 |
N2AB | 12303 | 37132;37133;37134 | chr2:178635494;178635493;178635492 | chr2:179500221;179500220;179500219 |
N2A | 11376 | 34351;34352;34353 | chr2:178635494;178635493;178635492 | chr2:179500221;179500220;179500219 |
N2B | 4879 | 14860;14861;14862 | chr2:178635494;178635493;178635492 | chr2:179500221;179500220;179500219 |
Novex-1 | 5004 | 15235;15236;15237 | chr2:178635494;178635493;178635492 | chr2:179500221;179500220;179500219 |
Novex-2 | 5071 | 15436;15437;15438 | chr2:178635494;178635493;178635492 | chr2:179500221;179500220;179500219 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/V | None | None | 0.999 | N | 0.778 | 0.521 | 0.423836183345 | gnomAD-4.0.0 | 1.61311E-06 | None | None | None | None | N | None | 0 | 2.34973E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.6234 | likely_pathogenic | 0.5138 | ambiguous | -0.938 | Destabilizing | 0.997 | D | 0.744 | deleterious | D | 0.526192305 | None | None | N |
E/C | 0.9886 | likely_pathogenic | 0.981 | pathogenic | -0.464 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
E/D | 0.2748 | likely_benign | 0.1928 | benign | -1.075 | Destabilizing | 0.997 | D | 0.671 | prob.neutral | D | 0.52714921 | None | None | N |
E/F | 0.9757 | likely_pathogenic | 0.9645 | pathogenic | -0.307 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
E/G | 0.7372 | likely_pathogenic | 0.653 | pathogenic | -1.312 | Destabilizing | 0.999 | D | 0.73 | deleterious | D | 0.529612131 | None | None | N |
E/H | 0.9446 | likely_pathogenic | 0.9082 | pathogenic | -0.512 | Destabilizing | 1.0 | D | 0.692 | prob.delet. | None | None | None | None | N |
E/I | 0.8454 | likely_pathogenic | 0.7748 | pathogenic | 0.087 | Stabilizing | 0.999 | D | 0.829 | deleterious | None | None | None | None | N |
E/K | 0.801 | likely_pathogenic | 0.6754 | pathogenic | -0.514 | Destabilizing | 0.997 | D | 0.727 | deleterious | D | 0.523599715 | None | None | N |
E/L | 0.8921 | likely_pathogenic | 0.8335 | pathogenic | 0.087 | Stabilizing | 0.999 | D | 0.803 | deleterious | None | None | None | None | N |
E/M | 0.9089 | likely_pathogenic | 0.8673 | pathogenic | 0.522 | Stabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
E/N | 0.7537 | likely_pathogenic | 0.6004 | pathogenic | -1.046 | Destabilizing | 0.999 | D | 0.731 | deleterious | None | None | None | None | N |
E/P | 0.9187 | likely_pathogenic | 0.8578 | pathogenic | -0.234 | Destabilizing | 0.999 | D | 0.811 | deleterious | None | None | None | None | N |
E/Q | 0.6171 | likely_pathogenic | 0.5038 | ambiguous | -0.915 | Destabilizing | 0.999 | D | 0.706 | prob.delet. | N | 0.485452218 | None | None | N |
E/R | 0.8787 | likely_pathogenic | 0.8109 | pathogenic | -0.215 | Destabilizing | 0.999 | D | 0.737 | deleterious | None | None | None | None | N |
E/S | 0.6676 | likely_pathogenic | 0.5517 | ambiguous | -1.373 | Destabilizing | 0.998 | D | 0.719 | prob.delet. | None | None | None | None | N |
E/T | 0.6848 | likely_pathogenic | 0.5507 | ambiguous | -1.056 | Destabilizing | 0.999 | D | 0.813 | deleterious | None | None | None | None | N |
E/V | 0.7063 | likely_pathogenic | 0.5903 | pathogenic | -0.234 | Destabilizing | 0.999 | D | 0.778 | deleterious | N | 0.517091842 | None | None | N |
E/W | 0.992 | likely_pathogenic | 0.9889 | pathogenic | None | Stabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | N |
E/Y | 0.9544 | likely_pathogenic | 0.9286 | pathogenic | -0.023 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.