Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13953 | 42082;42083;42084 | chr2:178635467;178635466;178635465 | chr2:179500194;179500193;179500192 |
N2AB | 12312 | 37159;37160;37161 | chr2:178635467;178635466;178635465 | chr2:179500194;179500193;179500192 |
N2A | 11385 | 34378;34379;34380 | chr2:178635467;178635466;178635465 | chr2:179500194;179500193;179500192 |
N2B | 4888 | 14887;14888;14889 | chr2:178635467;178635466;178635465 | chr2:179500194;179500193;179500192 |
Novex-1 | 5013 | 15262;15263;15264 | chr2:178635467;178635466;178635465 | chr2:179500194;179500193;179500192 |
Novex-2 | 5080 | 15463;15464;15465 | chr2:178635467;178635466;178635465 | chr2:179500194;179500193;179500192 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/I | rs1268324463 | 0.573 | 0.126 | N | 0.412 | 0.22 | 0.353336612579 | gnomAD-2.1.1 | 4.21E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.39E-05 | None | 0 | 0 | 0 |
R/I | rs1268324463 | 0.573 | 0.126 | N | 0.412 | 0.22 | 0.353336612579 | gnomAD-4.0.0 | 3.21587E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.80081E-05 | None | 0 | 0 | 0 | 1.45075E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.9507 | likely_pathogenic | 0.9065 | pathogenic | -0.759 | Destabilizing | 0.855 | D | 0.444 | neutral | None | None | None | None | N |
R/C | 0.7591 | likely_pathogenic | 0.633 | pathogenic | -0.852 | Destabilizing | 0.999 | D | 0.387 | neutral | None | None | None | None | N |
R/D | 0.9844 | likely_pathogenic | 0.9682 | pathogenic | -0.1 | Destabilizing | 0.99 | D | 0.504 | neutral | None | None | None | None | N |
R/E | 0.9067 | likely_pathogenic | 0.8351 | pathogenic | 0.069 | Stabilizing | 0.935 | D | 0.448 | neutral | None | None | None | None | N |
R/F | 0.9638 | likely_pathogenic | 0.92 | pathogenic | -0.357 | Destabilizing | 0.99 | D | 0.455 | neutral | None | None | None | None | N |
R/G | 0.9445 | likely_pathogenic | 0.8915 | pathogenic | -1.095 | Destabilizing | 0.956 | D | 0.5 | neutral | D | 0.560760352 | None | None | N |
R/H | 0.5469 | ambiguous | 0.3732 | ambiguous | -1.307 | Destabilizing | 0.997 | D | 0.419 | neutral | None | None | None | None | N |
R/I | 0.7671 | likely_pathogenic | 0.6061 | pathogenic | 0.158 | Stabilizing | 0.126 | N | 0.412 | neutral | N | 0.507691084 | None | None | N |
R/K | 0.494 | ambiguous | 0.3589 | ambiguous | -0.672 | Destabilizing | 0.126 | N | 0.232 | neutral | N | 0.500786852 | None | None | N |
R/L | 0.7907 | likely_pathogenic | 0.6649 | pathogenic | 0.158 | Stabilizing | 0.747 | D | 0.409 | neutral | None | None | None | None | N |
R/M | 0.8794 | likely_pathogenic | 0.7604 | pathogenic | -0.435 | Destabilizing | 0.99 | D | 0.471 | neutral | None | None | None | None | N |
R/N | 0.9595 | likely_pathogenic | 0.9205 | pathogenic | -0.48 | Destabilizing | 0.967 | D | 0.458 | neutral | None | None | None | None | N |
R/P | 0.9713 | likely_pathogenic | 0.9499 | pathogenic | -0.127 | Destabilizing | 0.997 | D | 0.469 | neutral | None | None | None | None | N |
R/Q | 0.5122 | ambiguous | 0.3547 | ambiguous | -0.471 | Destabilizing | 0.98 | D | 0.433 | neutral | None | None | None | None | N |
R/S | 0.9685 | likely_pathogenic | 0.9288 | pathogenic | -1.169 | Destabilizing | 0.844 | D | 0.511 | neutral | D | 0.558348619 | None | None | N |
R/T | 0.8818 | likely_pathogenic | 0.7404 | pathogenic | -0.801 | Destabilizing | 0.126 | N | 0.343 | neutral | N | 0.491927477 | None | None | N |
R/V | 0.8433 | likely_pathogenic | 0.7221 | pathogenic | -0.127 | Destabilizing | 0.161 | N | 0.401 | neutral | None | None | None | None | N |
R/W | 0.7351 | likely_pathogenic | 0.6151 | pathogenic | -0.042 | Destabilizing | 0.999 | D | 0.405 | neutral | None | None | None | None | N |
R/Y | 0.8761 | likely_pathogenic | 0.779 | pathogenic | 0.211 | Stabilizing | 0.997 | D | 0.477 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.