Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13954 | 42085;42086;42087 | chr2:178635464;178635463;178635462 | chr2:179500191;179500190;179500189 |
N2AB | 12313 | 37162;37163;37164 | chr2:178635464;178635463;178635462 | chr2:179500191;179500190;179500189 |
N2A | 11386 | 34381;34382;34383 | chr2:178635464;178635463;178635462 | chr2:179500191;179500190;179500189 |
N2B | 4889 | 14890;14891;14892 | chr2:178635464;178635463;178635462 | chr2:179500191;179500190;179500189 |
Novex-1 | 5014 | 15265;15266;15267 | chr2:178635464;178635463;178635462 | chr2:179500191;179500190;179500189 |
Novex-2 | 5081 | 15466;15467;15468 | chr2:178635464;178635463;178635462 | chr2:179500191;179500190;179500189 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 0.004 | D | 0.409 | 0.311 | 0.37568098594 | gnomAD-4.0.0 | 3.21484E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.76671E-06 | 0 | 0 |
Y/H | None | None | 0.924 | D | 0.465 | 0.286 | 0.39724302092 | gnomAD-4.0.0 | 2.74832E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 3.47464E-04 | 1.80369E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9451 | likely_pathogenic | 0.903 | pathogenic | -2.608 | Highly Destabilizing | 0.134 | N | 0.448 | neutral | None | None | None | None | N |
Y/C | 0.6539 | likely_pathogenic | 0.5304 | ambiguous | -1.426 | Destabilizing | 0.004 | N | 0.409 | neutral | D | 0.562686496 | None | None | N |
Y/D | 0.965 | likely_pathogenic | 0.9423 | pathogenic | -2.363 | Highly Destabilizing | 0.664 | D | 0.621 | neutral | D | 0.561263881 | None | None | N |
Y/E | 0.9805 | likely_pathogenic | 0.9621 | pathogenic | -2.218 | Highly Destabilizing | 0.724 | D | 0.571 | neutral | None | None | None | None | N |
Y/F | 0.2142 | likely_benign | 0.1614 | benign | -0.965 | Destabilizing | 0.534 | D | 0.468 | neutral | D | 0.556818088 | None | None | N |
Y/G | 0.943 | likely_pathogenic | 0.9091 | pathogenic | -2.965 | Highly Destabilizing | 0.428 | N | 0.563 | neutral | None | None | None | None | N |
Y/H | 0.7216 | likely_pathogenic | 0.58 | pathogenic | -1.388 | Destabilizing | 0.924 | D | 0.465 | neutral | D | 0.561263881 | None | None | N |
Y/I | 0.8149 | likely_pathogenic | 0.7176 | pathogenic | -1.464 | Destabilizing | 0.272 | N | 0.411 | neutral | None | None | None | None | N |
Y/K | 0.9751 | likely_pathogenic | 0.9517 | pathogenic | -1.991 | Destabilizing | 0.724 | D | 0.569 | neutral | None | None | None | None | N |
Y/L | 0.787 | likely_pathogenic | 0.7194 | pathogenic | -1.464 | Destabilizing | 0.134 | N | 0.474 | neutral | None | None | None | None | N |
Y/M | 0.9 | likely_pathogenic | 0.8383 | pathogenic | -1.12 | Destabilizing | 0.842 | D | 0.425 | neutral | None | None | None | None | N |
Y/N | 0.7942 | likely_pathogenic | 0.6684 | pathogenic | -2.602 | Highly Destabilizing | 0.664 | D | 0.569 | neutral | D | 0.561263881 | None | None | N |
Y/P | 0.9942 | likely_pathogenic | 0.9908 | pathogenic | -1.85 | Destabilizing | 0.842 | D | 0.615 | neutral | None | None | None | None | N |
Y/Q | 0.9523 | likely_pathogenic | 0.9057 | pathogenic | -2.431 | Highly Destabilizing | 0.842 | D | 0.445 | neutral | None | None | None | None | N |
Y/R | 0.9442 | likely_pathogenic | 0.9042 | pathogenic | -1.632 | Destabilizing | 0.842 | D | 0.559 | neutral | None | None | None | None | N |
Y/S | 0.8062 | likely_pathogenic | 0.6798 | pathogenic | -2.964 | Highly Destabilizing | 0.022 | N | 0.41 | neutral | N | 0.501570456 | None | None | N |
Y/T | 0.9188 | likely_pathogenic | 0.8402 | pathogenic | -2.718 | Highly Destabilizing | 0.272 | N | 0.492 | neutral | None | None | None | None | N |
Y/V | 0.7611 | likely_pathogenic | 0.6555 | pathogenic | -1.85 | Destabilizing | 0.002 | N | 0.287 | neutral | None | None | None | None | N |
Y/W | 0.7348 | likely_pathogenic | 0.692 | pathogenic | -0.455 | Destabilizing | 0.984 | D | 0.478 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.