Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13957 | 42094;42095;42096 | chr2:178635455;178635454;178635453 | chr2:179500182;179500181;179500180 |
N2AB | 12316 | 37171;37172;37173 | chr2:178635455;178635454;178635453 | chr2:179500182;179500181;179500180 |
N2A | 11389 | 34390;34391;34392 | chr2:178635455;178635454;178635453 | chr2:179500182;179500181;179500180 |
N2B | 4892 | 14899;14900;14901 | chr2:178635455;178635454;178635453 | chr2:179500182;179500181;179500180 |
Novex-1 | 5017 | 15274;15275;15276 | chr2:178635455;178635454;178635453 | chr2:179500182;179500181;179500180 |
Novex-2 | 5084 | 15475;15476;15477 | chr2:178635455;178635454;178635453 | chr2:179500182;179500181;179500180 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.007 | D | 0.247 | 0.202 | 0.222439326576 | gnomAD-4.0.0 | 6.87104E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.01808E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6446 | likely_pathogenic | 0.6262 | pathogenic | -0.565 | Destabilizing | 0.74 | D | 0.575 | neutral | None | None | None | None | N |
K/C | 0.8896 | likely_pathogenic | 0.8647 | pathogenic | -0.583 | Destabilizing | 0.996 | D | 0.645 | neutral | None | None | None | None | N |
K/D | 0.8748 | likely_pathogenic | 0.8697 | pathogenic | -0.198 | Destabilizing | 0.587 | D | 0.661 | prob.neutral | None | None | None | None | N |
K/E | 0.5406 | ambiguous | 0.4918 | ambiguous | -0.083 | Destabilizing | 0.682 | D | 0.53 | neutral | D | 0.58236 | None | None | N |
K/F | 0.8945 | likely_pathogenic | 0.8773 | pathogenic | -0.186 | Destabilizing | 0.996 | D | 0.636 | neutral | None | None | None | None | N |
K/G | 0.8167 | likely_pathogenic | 0.8107 | pathogenic | -0.943 | Destabilizing | 0.587 | D | 0.536 | neutral | None | None | None | None | N |
K/H | 0.448 | ambiguous | 0.4054 | ambiguous | -1.272 | Destabilizing | 0.909 | D | 0.63 | neutral | None | None | None | None | N |
K/I | 0.5414 | ambiguous | 0.5048 | ambiguous | 0.417 | Stabilizing | 0.953 | D | 0.686 | prob.delet. | None | None | None | None | N |
K/L | 0.5603 | ambiguous | 0.5385 | ambiguous | 0.417 | Stabilizing | 0.953 | D | 0.574 | neutral | None | None | None | None | N |
K/M | 0.4364 | ambiguous | 0.4001 | ambiguous | 0.249 | Stabilizing | 0.994 | D | 0.643 | neutral | D | 0.626149181 | None | None | N |
K/N | 0.5846 | likely_pathogenic | 0.6104 | pathogenic | -0.535 | Destabilizing | 0.007 | N | 0.247 | neutral | D | 0.624027255 | None | None | N |
K/P | 0.9376 | likely_pathogenic | 0.9482 | pathogenic | 0.12 | Stabilizing | 0.953 | D | 0.683 | prob.neutral | None | None | None | None | N |
K/Q | 0.2859 | likely_benign | 0.2507 | benign | -0.583 | Destabilizing | 0.883 | D | 0.634 | neutral | D | 0.582500837 | None | None | N |
K/R | 0.115 | likely_benign | 0.1122 | benign | -0.683 | Destabilizing | 0.682 | D | 0.567 | neutral | N | 0.52070235 | None | None | N |
K/S | 0.6714 | likely_pathogenic | 0.658 | pathogenic | -1.165 | Destabilizing | 0.587 | D | 0.519 | neutral | None | None | None | None | N |
K/T | 0.3413 | ambiguous | 0.2993 | benign | -0.843 | Destabilizing | 0.682 | D | 0.655 | prob.neutral | D | 0.624027255 | None | None | N |
K/V | 0.4571 | ambiguous | 0.4395 | ambiguous | 0.12 | Stabilizing | 0.953 | D | 0.681 | prob.neutral | None | None | None | None | N |
K/W | 0.9277 | likely_pathogenic | 0.9133 | pathogenic | -0.074 | Destabilizing | 0.996 | D | 0.583 | neutral | None | None | None | None | N |
K/Y | 0.7942 | likely_pathogenic | 0.7879 | pathogenic | 0.205 | Stabilizing | 0.984 | D | 0.665 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.