Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13966 | 42121;42122;42123 | chr2:178635293;178635292;178635291 | chr2:179500020;179500019;179500018 |
N2AB | 12325 | 37198;37199;37200 | chr2:178635293;178635292;178635291 | chr2:179500020;179500019;179500018 |
N2A | 11398 | 34417;34418;34419 | chr2:178635293;178635292;178635291 | chr2:179500020;179500019;179500018 |
N2B | 4901 | 14926;14927;14928 | chr2:178635293;178635292;178635291 | chr2:179500020;179500019;179500018 |
Novex-1 | 5026 | 15301;15302;15303 | chr2:178635293;178635292;178635291 | chr2:179500020;179500019;179500018 |
Novex-2 | 5093 | 15502;15503;15504 | chr2:178635293;178635292;178635291 | chr2:179500020;179500019;179500018 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | None | None | 0.001 | N | 0.279 | 0.095 | 0.168933306366 | gnomAD-4.0.0 | 1.59281E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86049E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2559 | likely_benign | 0.2164 | benign | -0.392 | Destabilizing | 0.061 | N | 0.551 | neutral | D | 0.548867108 | None | None | N |
E/C | 0.9173 | likely_pathogenic | 0.9131 | pathogenic | -0.236 | Destabilizing | 0.934 | D | 0.854 | deleterious | None | None | None | None | N |
E/D | 0.192 | likely_benign | 0.1276 | benign | -0.422 | Destabilizing | None | N | 0.233 | neutral | N | 0.483335599 | None | None | N |
E/F | 0.8652 | likely_pathogenic | 0.8345 | pathogenic | -0.064 | Destabilizing | 0.789 | D | 0.78 | deleterious | None | None | None | None | N |
E/G | 0.454 | ambiguous | 0.3447 | ambiguous | -0.616 | Destabilizing | 0.115 | N | 0.593 | neutral | D | 0.551394562 | None | None | N |
E/H | 0.6826 | likely_pathogenic | 0.6 | pathogenic | 0.266 | Stabilizing | 0.378 | N | 0.583 | neutral | None | None | None | None | N |
E/I | 0.4903 | ambiguous | 0.4596 | ambiguous | 0.174 | Stabilizing | 0.552 | D | 0.821 | deleterious | None | None | None | None | N |
E/K | 0.3828 | ambiguous | 0.3082 | benign | 0.271 | Stabilizing | 0.002 | N | 0.313 | neutral | N | 0.493779559 | None | None | N |
E/L | 0.5499 | ambiguous | 0.5056 | ambiguous | 0.174 | Stabilizing | 0.378 | N | 0.578 | neutral | None | None | None | None | N |
E/M | 0.5793 | likely_pathogenic | 0.579 | pathogenic | 0.15 | Stabilizing | 0.823 | D | 0.784 | deleterious | None | None | None | None | N |
E/N | 0.3598 | ambiguous | 0.2789 | benign | -0.247 | Destabilizing | 0.08 | N | 0.576 | neutral | None | None | None | None | N |
E/P | 0.875 | likely_pathogenic | 0.8003 | pathogenic | 0.006 | Stabilizing | 0.552 | D | 0.639 | neutral | None | None | None | None | N |
E/Q | 0.1649 | likely_benign | 0.1776 | benign | -0.177 | Destabilizing | 0.001 | N | 0.279 | neutral | N | 0.506878524 | None | None | N |
E/R | 0.5376 | ambiguous | 0.4587 | ambiguous | 0.584 | Stabilizing | 0.08 | N | 0.576 | neutral | None | None | None | None | N |
E/S | 0.2981 | likely_benign | 0.2386 | benign | -0.384 | Destabilizing | 0.08 | N | 0.46 | neutral | None | None | None | None | N |
E/T | 0.283 | likely_benign | 0.2375 | benign | -0.192 | Destabilizing | 0.378 | N | 0.587 | neutral | None | None | None | None | N |
E/V | 0.3143 | likely_benign | 0.28 | benign | 0.006 | Stabilizing | 0.314 | N | 0.603 | neutral | N | 0.505657197 | None | None | N |
E/W | 0.9624 | likely_pathogenic | 0.9536 | pathogenic | 0.145 | Stabilizing | 0.934 | D | 0.866 | deleterious | None | None | None | None | N |
E/Y | 0.8098 | likely_pathogenic | 0.7501 | pathogenic | 0.193 | Stabilizing | 0.552 | D | 0.811 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.