Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC1396842127;42128;42129 chr2:178635287;178635286;178635285chr2:179500014;179500013;179500012
N2AB1232737204;37205;37206 chr2:178635287;178635286;178635285chr2:179500014;179500013;179500012
N2A1140034423;34424;34425 chr2:178635287;178635286;178635285chr2:179500014;179500013;179500012
N2B490314932;14933;14934 chr2:178635287;178635286;178635285chr2:179500014;179500013;179500012
Novex-1502815307;15308;15309 chr2:178635287;178635286;178635285chr2:179500014;179500013;179500012
Novex-2509515508;15509;15510 chr2:178635287;178635286;178635285chr2:179500014;179500013;179500012
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTT
  • RefSeq wild type template codon: GAA
  • Domain: Ig-90
  • Domain position: 4
  • Structural Position: 4
  • Q(SASA): 0.4036
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/R rs879228460 None 1.0 N 0.798 0.384 0.590611164678 gnomAD-3.1.2 6.57E-06 None None None None N None 0 0 0 0 0 None 0 0 0 2.07211E-04 0
L/R rs879228460 None 1.0 N 0.798 0.384 0.590611164678 gnomAD-4.0.0 6.57393E-06 None None None None N None 0 0 None 0 0 None 0 0 0 2.07211E-04 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.6311 likely_pathogenic 0.413 ambiguous -0.959 Destabilizing 0.993 D 0.566 neutral None None None None N
L/C 0.8424 likely_pathogenic 0.7673 pathogenic -0.666 Destabilizing 1.0 D 0.689 prob.delet. None None None None N
L/D 0.9494 likely_pathogenic 0.8811 pathogenic -0.186 Destabilizing 1.0 D 0.762 deleterious None None None None N
L/E 0.6815 likely_pathogenic 0.4912 ambiguous -0.244 Destabilizing 1.0 D 0.715 prob.delet. None None None None N
L/F 0.5913 likely_pathogenic 0.4028 ambiguous -0.697 Destabilizing 0.999 D 0.69 prob.delet. N 0.509278938 None None N
L/G 0.8789 likely_pathogenic 0.743 pathogenic -1.184 Destabilizing 1.0 D 0.72 deleterious None None None None N
L/H 0.6708 likely_pathogenic 0.4779 ambiguous -0.325 Destabilizing 1.0 D 0.767 deleterious N 0.510321716 None None N
L/I 0.1648 likely_benign 0.114 benign -0.465 Destabilizing 0.983 D 0.473 neutral N 0.432285559 None None N
L/K 0.4615 ambiguous 0.3101 benign -0.535 Destabilizing 1.0 D 0.765 deleterious None None None None N
L/M 0.2723 likely_benign 0.1897 benign -0.433 Destabilizing 0.999 D 0.673 prob.neutral None None None None N
L/N 0.7822 likely_pathogenic 0.5749 pathogenic -0.34 Destabilizing 1.0 D 0.755 deleterious None None None None N
L/P 0.9688 likely_pathogenic 0.9171 pathogenic -0.596 Destabilizing 1.0 D 0.767 deleterious N 0.5094858 None None N
L/Q 0.3817 ambiguous 0.2341 benign -0.551 Destabilizing 1.0 D 0.769 deleterious None None None None N
L/R 0.454 ambiguous 0.3152 benign 0.055 Stabilizing 1.0 D 0.798 deleterious N 0.468529615 None None N
L/S 0.7578 likely_pathogenic 0.5041 ambiguous -0.897 Destabilizing 0.999 D 0.777 deleterious None None None None N
L/T 0.4863 ambiguous 0.2879 benign -0.845 Destabilizing 0.998 D 0.708 prob.delet. None None None None N
L/V 0.2041 likely_benign 0.1333 benign -0.596 Destabilizing 0.603 D 0.307 neutral N 0.437116006 None None N
L/W 0.8188 likely_pathogenic 0.6884 pathogenic -0.699 Destabilizing 1.0 D 0.763 deleterious None None None None N
L/Y 0.8142 likely_pathogenic 0.6659 pathogenic -0.476 Destabilizing 1.0 D 0.725 deleterious None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.