Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13971 | 42136;42137;42138 | chr2:178635278;178635277;178635276 | chr2:179500005;179500004;179500003 |
N2AB | 12330 | 37213;37214;37215 | chr2:178635278;178635277;178635276 | chr2:179500005;179500004;179500003 |
N2A | 11403 | 34432;34433;34434 | chr2:178635278;178635277;178635276 | chr2:179500005;179500004;179500003 |
N2B | 4906 | 14941;14942;14943 | chr2:178635278;178635277;178635276 | chr2:179500005;179500004;179500003 |
Novex-1 | 5031 | 15316;15317;15318 | chr2:178635278;178635277;178635276 | chr2:179500005;179500004;179500003 |
Novex-2 | 5098 | 15517;15518;15519 | chr2:178635278;178635277;178635276 | chr2:179500005;179500004;179500003 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | None | None | 0.664 | N | 0.678 | 0.056 | 0.193865811164 | gnomAD-4.0.0 | 1.59241E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86004E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8199 | likely_pathogenic | 0.7491 | pathogenic | -2.546 | Highly Destabilizing | 0.236 | N | 0.575 | neutral | None | None | None | None | N |
I/C | 0.9788 | likely_pathogenic | 0.9579 | pathogenic | -1.887 | Destabilizing | 0.942 | D | 0.639 | neutral | None | None | None | None | N |
I/D | 0.9987 | likely_pathogenic | 0.9973 | pathogenic | -2.813 | Highly Destabilizing | 0.942 | D | 0.811 | deleterious | None | None | None | None | N |
I/E | 0.9946 | likely_pathogenic | 0.9912 | pathogenic | -2.6 | Highly Destabilizing | 0.842 | D | 0.818 | deleterious | None | None | None | None | N |
I/F | 0.9278 | likely_pathogenic | 0.8498 | pathogenic | -1.453 | Destabilizing | 0.272 | N | 0.661 | prob.neutral | None | None | None | None | N |
I/G | 0.9919 | likely_pathogenic | 0.9812 | pathogenic | -3.087 | Highly Destabilizing | 0.842 | D | 0.789 | deleterious | None | None | None | None | N |
I/H | 0.9986 | likely_pathogenic | 0.9961 | pathogenic | -2.513 | Highly Destabilizing | 0.984 | D | 0.743 | deleterious | None | None | None | None | N |
I/K | 0.9938 | likely_pathogenic | 0.9869 | pathogenic | -1.954 | Destabilizing | 0.534 | D | 0.771 | deleterious | N | 0.435079279 | None | None | N |
I/L | 0.2273 | likely_benign | 0.1235 | benign | -0.991 | Destabilizing | None | N | 0.143 | neutral | N | 0.331927265 | None | None | N |
I/M | 0.3974 | ambiguous | 0.2412 | benign | -1.021 | Destabilizing | 0.664 | D | 0.678 | prob.neutral | N | 0.433216058 | None | None | N |
I/N | 0.9898 | likely_pathogenic | 0.9766 | pathogenic | -2.231 | Highly Destabilizing | 0.942 | D | 0.809 | deleterious | None | None | None | None | N |
I/P | 0.9382 | likely_pathogenic | 0.9021 | pathogenic | -1.489 | Destabilizing | 0.942 | D | 0.813 | deleterious | None | None | None | None | N |
I/Q | 0.9938 | likely_pathogenic | 0.9864 | pathogenic | -2.118 | Highly Destabilizing | 0.942 | D | 0.803 | deleterious | None | None | None | None | N |
I/R | 0.9918 | likely_pathogenic | 0.9822 | pathogenic | -1.652 | Destabilizing | 0.8 | D | 0.808 | deleterious | N | 0.435079279 | None | None | N |
I/S | 0.9674 | likely_pathogenic | 0.9411 | pathogenic | -2.933 | Highly Destabilizing | 0.603 | D | 0.653 | prob.neutral | None | None | None | None | N |
I/T | 0.8488 | likely_pathogenic | 0.7713 | pathogenic | -2.577 | Highly Destabilizing | 0.361 | N | 0.633 | neutral | N | 0.434315403 | None | None | N |
I/V | 0.1471 | likely_benign | 0.1238 | benign | -1.489 | Destabilizing | 0.022 | N | 0.399 | neutral | N | 0.432991937 | None | None | N |
I/W | 0.9981 | likely_pathogenic | 0.996 | pathogenic | -1.827 | Destabilizing | 0.984 | D | 0.758 | deleterious | None | None | None | None | N |
I/Y | 0.9964 | likely_pathogenic | 0.9915 | pathogenic | -1.554 | Destabilizing | 0.842 | D | 0.758 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.