Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13973 | 42142;42143;42144 | chr2:178635272;178635271;178635270 | chr2:179499999;179499998;179499997 |
N2AB | 12332 | 37219;37220;37221 | chr2:178635272;178635271;178635270 | chr2:179499999;179499998;179499997 |
N2A | 11405 | 34438;34439;34440 | chr2:178635272;178635271;178635270 | chr2:179499999;179499998;179499997 |
N2B | 4908 | 14947;14948;14949 | chr2:178635272;178635271;178635270 | chr2:179499999;179499998;179499997 |
Novex-1 | 5033 | 15322;15323;15324 | chr2:178635272;178635271;178635270 | chr2:179499999;179499998;179499997 |
Novex-2 | 5100 | 15523;15524;15525 | chr2:178635272;178635271;178635270 | chr2:179499999;179499998;179499997 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | None | None | 0.015 | N | 0.322 | 0.222 | 0.159798565429 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
D/N | None | None | 0.919 | N | 0.541 | 0.193 | 0.167679373172 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.9015 | likely_pathogenic | 0.8177 | pathogenic | -0.216 | Destabilizing | 0.702 | D | 0.553 | neutral | N | 0.502602284 | None | None | N |
D/C | 0.9965 | likely_pathogenic | 0.9921 | pathogenic | -0.08 | Destabilizing | 0.999 | D | 0.803 | deleterious | None | None | None | None | N |
D/E | 0.8853 | likely_pathogenic | 0.8045 | pathogenic | -0.326 | Destabilizing | 0.923 | D | 0.544 | neutral | N | 0.5000786 | None | None | N |
D/F | 0.9972 | likely_pathogenic | 0.9944 | pathogenic | 0.003 | Stabilizing | 0.997 | D | 0.787 | deleterious | None | None | None | None | N |
D/G | 0.8659 | likely_pathogenic | 0.7718 | pathogenic | -0.441 | Destabilizing | 0.015 | N | 0.322 | neutral | N | 0.423589755 | None | None | N |
D/H | 0.9696 | likely_pathogenic | 0.9336 | pathogenic | 0.199 | Stabilizing | 0.999 | D | 0.623 | neutral | N | 0.504458443 | None | None | N |
D/I | 0.9947 | likely_pathogenic | 0.9872 | pathogenic | 0.337 | Stabilizing | 0.991 | D | 0.785 | deleterious | None | None | None | None | N |
D/K | 0.9878 | likely_pathogenic | 0.9724 | pathogenic | 0.321 | Stabilizing | 0.938 | D | 0.658 | prob.neutral | None | None | None | None | N |
D/L | 0.9909 | likely_pathogenic | 0.9824 | pathogenic | 0.337 | Stabilizing | 0.991 | D | 0.669 | prob.neutral | None | None | None | None | N |
D/M | 0.9964 | likely_pathogenic | 0.9909 | pathogenic | 0.344 | Stabilizing | 0.999 | D | 0.777 | deleterious | None | None | None | None | N |
D/N | 0.4387 | ambiguous | 0.2943 | benign | -0.124 | Destabilizing | 0.919 | D | 0.541 | neutral | N | 0.431191681 | None | None | N |
D/P | 0.9594 | likely_pathogenic | 0.9275 | pathogenic | 0.176 | Stabilizing | 0.991 | D | 0.631 | neutral | None | None | None | None | N |
D/Q | 0.9885 | likely_pathogenic | 0.9696 | pathogenic | -0.056 | Destabilizing | 0.991 | D | 0.578 | neutral | None | None | None | None | N |
D/R | 0.993 | likely_pathogenic | 0.9834 | pathogenic | 0.548 | Stabilizing | 0.991 | D | 0.788 | deleterious | None | None | None | None | N |
D/S | 0.754 | likely_pathogenic | 0.5971 | pathogenic | -0.213 | Destabilizing | 0.198 | N | 0.112 | neutral | None | None | None | None | N |
D/T | 0.9507 | likely_pathogenic | 0.8992 | pathogenic | -0.029 | Destabilizing | 0.883 | D | 0.535 | neutral | None | None | None | None | N |
D/V | 0.9812 | likely_pathogenic | 0.9597 | pathogenic | 0.176 | Stabilizing | 0.988 | D | 0.68 | prob.neutral | N | 0.505072902 | None | None | N |
D/W | 0.9995 | likely_pathogenic | 0.9987 | pathogenic | 0.164 | Stabilizing | 0.999 | D | 0.801 | deleterious | None | None | None | None | N |
D/Y | 0.9745 | likely_pathogenic | 0.9437 | pathogenic | 0.253 | Stabilizing | 0.996 | D | 0.778 | deleterious | N | 0.506116766 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.