Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13979 | 42160;42161;42162 | chr2:178635254;178635253;178635252 | chr2:179499981;179499980;179499979 |
N2AB | 12338 | 37237;37238;37239 | chr2:178635254;178635253;178635252 | chr2:179499981;179499980;179499979 |
N2A | 11411 | 34456;34457;34458 | chr2:178635254;178635253;178635252 | chr2:179499981;179499980;179499979 |
N2B | 4914 | 14965;14966;14967 | chr2:178635254;178635253;178635252 | chr2:179499981;179499980;179499979 |
Novex-1 | 5039 | 15340;15341;15342 | chr2:178635254;178635253;178635252 | chr2:179499981;179499980;179499979 |
Novex-2 | 5106 | 15541;15542;15543 | chr2:178635254;178635253;178635252 | chr2:179499981;179499980;179499979 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs1559980687 | None | 0.997 | N | 0.667 | 0.225 | 0.262662153117 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.6E-05 | None | 0 | None | 0 | 0 | 0 |
K/R | rs1559980687 | None | 0.997 | N | 0.667 | 0.225 | 0.262662153117 | gnomAD-4.0.0 | 1.59234E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.78102E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.8983 | likely_pathogenic | 0.8869 | pathogenic | 0.056 | Stabilizing | 0.998 | D | 0.767 | deleterious | None | None | None | None | N |
K/C | 0.9702 | likely_pathogenic | 0.9661 | pathogenic | -0.104 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
K/D | 0.8798 | likely_pathogenic | 0.8489 | pathogenic | 0.041 | Stabilizing | 0.999 | D | 0.799 | deleterious | None | None | None | None | N |
K/E | 0.7577 | likely_pathogenic | 0.7141 | pathogenic | 0.064 | Stabilizing | 0.997 | D | 0.737 | deleterious | N | 0.444878128 | None | None | N |
K/F | 0.9786 | likely_pathogenic | 0.9771 | pathogenic | -0.01 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
K/G | 0.618 | likely_pathogenic | 0.6121 | pathogenic | -0.182 | Destabilizing | 0.999 | D | 0.671 | prob.neutral | None | None | None | None | N |
K/H | 0.7207 | likely_pathogenic | 0.7088 | pathogenic | -0.451 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
K/I | 0.9672 | likely_pathogenic | 0.9626 | pathogenic | 0.612 | Stabilizing | 0.999 | D | 0.81 | deleterious | N | 0.487090979 | None | None | N |
K/L | 0.8743 | likely_pathogenic | 0.864 | pathogenic | 0.612 | Stabilizing | 0.999 | D | 0.671 | prob.neutral | None | None | None | None | N |
K/M | 0.7516 | likely_pathogenic | 0.7268 | pathogenic | 0.328 | Stabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
K/N | 0.7388 | likely_pathogenic | 0.7175 | pathogenic | 0.248 | Stabilizing | 0.999 | D | 0.831 | deleterious | N | 0.443284162 | None | None | N |
K/P | 0.9895 | likely_pathogenic | 0.9886 | pathogenic | 0.456 | Stabilizing | 0.999 | D | 0.773 | deleterious | None | None | None | None | N |
K/Q | 0.5343 | ambiguous | 0.5267 | ambiguous | 0.096 | Stabilizing | 0.999 | D | 0.851 | deleterious | N | 0.485127007 | None | None | N |
K/R | 0.1984 | likely_benign | 0.1951 | benign | -0.074 | Destabilizing | 0.997 | D | 0.667 | prob.neutral | N | 0.432381208 | None | None | N |
K/S | 0.8887 | likely_pathogenic | 0.8806 | pathogenic | -0.224 | Destabilizing | 0.998 | D | 0.785 | deleterious | None | None | None | None | N |
K/T | 0.768 | likely_pathogenic | 0.7673 | pathogenic | -0.046 | Destabilizing | 0.999 | D | 0.777 | deleterious | N | 0.434635182 | None | None | N |
K/V | 0.9428 | likely_pathogenic | 0.9375 | pathogenic | 0.456 | Stabilizing | 0.999 | D | 0.737 | deleterious | None | None | None | None | N |
K/W | 0.9737 | likely_pathogenic | 0.9675 | pathogenic | -0.021 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
K/Y | 0.9258 | likely_pathogenic | 0.9139 | pathogenic | 0.313 | Stabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.