Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14002 | 42229;42230;42231 | chr2:178635185;178635184;178635183 | chr2:179499912;179499911;179499910 |
N2AB | 12361 | 37306;37307;37308 | chr2:178635185;178635184;178635183 | chr2:179499912;179499911;179499910 |
N2A | 11434 | 34525;34526;34527 | chr2:178635185;178635184;178635183 | chr2:179499912;179499911;179499910 |
N2B | 4937 | 15034;15035;15036 | chr2:178635185;178635184;178635183 | chr2:179499912;179499911;179499910 |
Novex-1 | 5062 | 15409;15410;15411 | chr2:178635185;178635184;178635183 | chr2:179499912;179499911;179499910 |
Novex-2 | 5129 | 15610;15611;15612 | chr2:178635185;178635184;178635183 | chr2:179499912;179499911;179499910 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.91 | N | 0.463 | 0.231 | 0.180583059064 | gnomAD-4.0.0 | 2.05374E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.7995E-06 | 0 | 1.65788E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.7887 | likely_pathogenic | 0.6167 | pathogenic | -0.344 | Destabilizing | 0.953 | D | 0.443 | neutral | N | 0.423454814 | None | None | N |
E/C | 0.9919 | likely_pathogenic | 0.9836 | pathogenic | -0.329 | Destabilizing | 1.0 | D | 0.622 | neutral | None | None | None | None | N |
E/D | 0.4423 | ambiguous | 0.2576 | benign | -0.398 | Destabilizing | 0.953 | D | 0.449 | neutral | N | 0.43485487 | None | None | N |
E/F | 0.9885 | likely_pathogenic | 0.9733 | pathogenic | -0.007 | Destabilizing | 1.0 | D | 0.607 | neutral | None | None | None | None | N |
E/G | 0.8761 | likely_pathogenic | 0.7456 | pathogenic | -0.56 | Destabilizing | 0.993 | D | 0.423 | neutral | N | 0.458155103 | None | None | N |
E/H | 0.9536 | likely_pathogenic | 0.8927 | pathogenic | 0.419 | Stabilizing | 0.999 | D | 0.495 | neutral | None | None | None | None | N |
E/I | 0.9035 | likely_pathogenic | 0.7926 | pathogenic | 0.197 | Stabilizing | 0.998 | D | 0.66 | prob.neutral | None | None | None | None | N |
E/K | 0.8321 | likely_pathogenic | 0.6511 | pathogenic | 0.244 | Stabilizing | 0.91 | D | 0.463 | neutral | N | 0.433987894 | None | None | N |
E/L | 0.9513 | likely_pathogenic | 0.8807 | pathogenic | 0.197 | Stabilizing | 0.99 | D | 0.585 | neutral | None | None | None | None | N |
E/M | 0.9415 | likely_pathogenic | 0.8725 | pathogenic | 0.085 | Stabilizing | 1.0 | D | 0.501 | neutral | None | None | None | None | N |
E/N | 0.7983 | likely_pathogenic | 0.6178 | pathogenic | -0.288 | Destabilizing | 0.995 | D | 0.523 | neutral | None | None | None | None | N |
E/P | 0.9977 | likely_pathogenic | 0.9919 | pathogenic | 0.036 | Stabilizing | 0.998 | D | 0.524 | neutral | None | None | None | None | N |
E/Q | 0.5671 | likely_pathogenic | 0.3953 | ambiguous | -0.207 | Destabilizing | 0.441 | N | 0.257 | neutral | N | 0.430620474 | None | None | N |
E/R | 0.9021 | likely_pathogenic | 0.8027 | pathogenic | 0.598 | Stabilizing | 0.99 | D | 0.51 | neutral | None | None | None | None | N |
E/S | 0.7984 | likely_pathogenic | 0.6343 | pathogenic | -0.422 | Destabilizing | 0.964 | D | 0.489 | neutral | None | None | None | None | N |
E/T | 0.8152 | likely_pathogenic | 0.6482 | pathogenic | -0.232 | Destabilizing | 0.995 | D | 0.515 | neutral | None | None | None | None | N |
E/V | 0.8019 | likely_pathogenic | 0.6282 | pathogenic | 0.036 | Stabilizing | 0.993 | D | 0.511 | neutral | N | 0.430202296 | None | None | N |
E/W | 0.9981 | likely_pathogenic | 0.9953 | pathogenic | 0.193 | Stabilizing | 1.0 | D | 0.624 | neutral | None | None | None | None | N |
E/Y | 0.9784 | likely_pathogenic | 0.9508 | pathogenic | 0.246 | Stabilizing | 0.998 | D | 0.535 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.