Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14005 | 42238;42239;42240 | chr2:178635176;178635175;178635174 | chr2:179499903;179499902;179499901 |
N2AB | 12364 | 37315;37316;37317 | chr2:178635176;178635175;178635174 | chr2:179499903;179499902;179499901 |
N2A | 11437 | 34534;34535;34536 | chr2:178635176;178635175;178635174 | chr2:179499903;179499902;179499901 |
N2B | 4940 | 15043;15044;15045 | chr2:178635176;178635175;178635174 | chr2:179499903;179499902;179499901 |
Novex-1 | 5065 | 15418;15419;15420 | chr2:178635176;178635175;178635174 | chr2:179499903;179499902;179499901 |
Novex-2 | 5132 | 15619;15620;15621 | chr2:178635176;178635175;178635174 | chr2:179499903;179499902;179499901 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/S | None | None | 0.524 | N | 0.515 | 0.137 | 0.110078149338 | gnomAD-4.0.0 | 1.59332E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43579E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.8461 | likely_pathogenic | 0.6978 | pathogenic | 0.119 | Stabilizing | 0.745 | D | 0.499 | neutral | None | None | None | None | N |
R/C | 0.6392 | likely_pathogenic | 0.4498 | ambiguous | -0.258 | Destabilizing | 0.998 | D | 0.501 | neutral | None | None | None | None | N |
R/D | 0.95 | likely_pathogenic | 0.8928 | pathogenic | -0.28 | Destabilizing | 0.935 | D | 0.577 | neutral | None | None | None | None | N |
R/E | 0.7682 | likely_pathogenic | 0.6 | pathogenic | -0.223 | Destabilizing | 0.935 | D | 0.515 | neutral | None | None | None | None | N |
R/F | 0.8605 | likely_pathogenic | 0.728 | pathogenic | -0.189 | Destabilizing | 0.994 | D | 0.523 | neutral | None | None | None | None | N |
R/G | 0.7991 | likely_pathogenic | 0.6182 | pathogenic | -0.037 | Destabilizing | 0.915 | D | 0.593 | neutral | N | 0.42821208 | None | None | N |
R/H | 0.3133 | likely_benign | 0.1792 | benign | -0.598 | Destabilizing | 0.994 | D | 0.459 | neutral | None | None | None | None | N |
R/I | 0.6659 | likely_pathogenic | 0.4486 | ambiguous | 0.484 | Stabilizing | 0.961 | D | 0.545 | neutral | None | None | None | None | N |
R/K | 0.2702 | likely_benign | 0.1827 | benign | -0.105 | Destabilizing | 0.688 | D | 0.513 | neutral | N | 0.428044626 | None | None | N |
R/L | 0.5891 | likely_pathogenic | 0.3781 | ambiguous | 0.484 | Stabilizing | 0.876 | D | 0.529 | neutral | None | None | None | None | N |
R/M | 0.7141 | likely_pathogenic | 0.496 | ambiguous | -0.076 | Destabilizing | 0.991 | D | 0.505 | neutral | N | 0.428755644 | None | None | N |
R/N | 0.9001 | likely_pathogenic | 0.7807 | pathogenic | -0.103 | Destabilizing | 0.935 | D | 0.489 | neutral | None | None | None | None | N |
R/P | 0.9192 | likely_pathogenic | 0.8607 | pathogenic | 0.381 | Stabilizing | 0.994 | D | 0.561 | neutral | None | None | None | None | N |
R/Q | 0.2907 | likely_benign | 0.1694 | benign | -0.093 | Destabilizing | 0.978 | D | 0.557 | neutral | None | None | None | None | N |
R/S | 0.8845 | likely_pathogenic | 0.7311 | pathogenic | -0.25 | Destabilizing | 0.524 | D | 0.515 | neutral | N | 0.433527427 | None | None | N |
R/T | 0.7228 | likely_pathogenic | 0.4677 | ambiguous | -0.077 | Destabilizing | 0.01 | N | 0.304 | neutral | N | 0.405135637 | None | None | N |
R/V | 0.722 | likely_pathogenic | 0.5268 | ambiguous | 0.381 | Stabilizing | 0.876 | D | 0.575 | neutral | None | None | None | None | N |
R/W | 0.5849 | likely_pathogenic | 0.3891 | ambiguous | -0.394 | Destabilizing | 0.998 | D | 0.503 | neutral | N | 0.42980598 | None | None | N |
R/Y | 0.7402 | likely_pathogenic | 0.5556 | ambiguous | 0.03 | Stabilizing | 0.994 | D | 0.547 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.