Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14012 | 42259;42260;42261 | chr2:178634840;178634839;178634838 | chr2:179499567;179499566;179499565 |
N2AB | 12371 | 37336;37337;37338 | chr2:178634840;178634839;178634838 | chr2:179499567;179499566;179499565 |
N2A | 11444 | 34555;34556;34557 | chr2:178634840;178634839;178634838 | chr2:179499567;179499566;179499565 |
N2B | 4947 | 15064;15065;15066 | chr2:178634840;178634839;178634838 | chr2:179499567;179499566;179499565 |
Novex-1 | 5072 | 15439;15440;15441 | chr2:178634840;178634839;178634838 | chr2:179499567;179499566;179499565 |
Novex-2 | 5139 | 15640;15641;15642 | chr2:178634840;178634839;178634838 | chr2:179499567;179499566;179499565 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs1425644741 | None | 0.985 | N | 0.321 | 0.188 | 0.394837016283 | gnomAD-4.0.0 | 6.42164E-06 | None | None | None | None | N | None | 0 | 2.36507E-05 | None | 0 | 0 | None | 0 | 0 | 5.74142E-06 | 0 | 3.04414E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9805 | likely_pathogenic | 0.9448 | pathogenic | -2.056 | Highly Destabilizing | 0.998 | D | 0.571 | neutral | None | None | None | None | N |
I/C | 0.9929 | likely_pathogenic | 0.9784 | pathogenic | -1.133 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
I/D | 0.9977 | likely_pathogenic | 0.9915 | pathogenic | -1.736 | Destabilizing | 0.999 | D | 0.791 | deleterious | None | None | None | None | N |
I/E | 0.9791 | likely_pathogenic | 0.9545 | pathogenic | -1.666 | Destabilizing | 0.999 | D | 0.785 | deleterious | None | None | None | None | N |
I/F | 0.7556 | likely_pathogenic | 0.5462 | ambiguous | -1.378 | Destabilizing | 0.999 | D | 0.725 | deleterious | N | 0.429693322 | None | None | N |
I/G | 0.9961 | likely_pathogenic | 0.9863 | pathogenic | -2.46 | Highly Destabilizing | 0.999 | D | 0.79 | deleterious | None | None | None | None | N |
I/H | 0.9951 | likely_pathogenic | 0.9816 | pathogenic | -1.776 | Destabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | N |
I/K | 0.9878 | likely_pathogenic | 0.962 | pathogenic | -1.467 | Destabilizing | 0.999 | D | 0.789 | deleterious | None | None | None | None | N |
I/L | 0.6003 | likely_pathogenic | 0.3871 | ambiguous | -0.97 | Destabilizing | 0.985 | D | 0.329 | neutral | N | 0.431775142 | None | None | N |
I/M | 0.2964 | likely_benign | 0.1736 | benign | -0.696 | Destabilizing | 0.999 | D | 0.703 | prob.delet. | N | 0.436321918 | None | None | N |
I/N | 0.9672 | likely_pathogenic | 0.9039 | pathogenic | -1.336 | Destabilizing | 0.999 | D | 0.796 | deleterious | D | 0.528461033 | None | None | N |
I/P | 0.9982 | likely_pathogenic | 0.993 | pathogenic | -1.305 | Destabilizing | 0.999 | D | 0.8 | deleterious | None | None | None | None | N |
I/Q | 0.9776 | likely_pathogenic | 0.9362 | pathogenic | -1.435 | Destabilizing | 1.0 | D | 0.776 | deleterious | None | None | None | None | N |
I/R | 0.9854 | likely_pathogenic | 0.9533 | pathogenic | -0.945 | Destabilizing | 0.999 | D | 0.798 | deleterious | None | None | None | None | N |
I/S | 0.9809 | likely_pathogenic | 0.9371 | pathogenic | -1.967 | Destabilizing | 0.999 | D | 0.752 | deleterious | D | 0.526413773 | None | None | N |
I/T | 0.9534 | likely_pathogenic | 0.9117 | pathogenic | -1.774 | Destabilizing | 0.999 | D | 0.735 | deleterious | N | 0.48393189 | None | None | N |
I/V | 0.4383 | ambiguous | 0.3115 | benign | -1.305 | Destabilizing | 0.985 | D | 0.321 | neutral | N | 0.423337162 | None | None | N |
I/W | 0.9872 | likely_pathogenic | 0.9639 | pathogenic | -1.565 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
I/Y | 0.9616 | likely_pathogenic | 0.8952 | pathogenic | -1.329 | Destabilizing | 0.999 | D | 0.787 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.