Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14013 | 42262;42263;42264 | chr2:178634837;178634836;178634835 | chr2:179499564;179499563;179499562 |
N2AB | 12372 | 37339;37340;37341 | chr2:178634837;178634836;178634835 | chr2:179499564;179499563;179499562 |
N2A | 11445 | 34558;34559;34560 | chr2:178634837;178634836;178634835 | chr2:179499564;179499563;179499562 |
N2B | 4948 | 15067;15068;15069 | chr2:178634837;178634836;178634835 | chr2:179499564;179499563;179499562 |
Novex-1 | 5073 | 15442;15443;15444 | chr2:178634837;178634836;178634835 | chr2:179499564;179499563;179499562 |
Novex-2 | 5140 | 15643;15644;15645 | chr2:178634837;178634836;178634835 | chr2:179499564;179499563;179499562 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | rs1188399173 | None | 0.981 | N | 0.579 | 0.168 | 0.208000267992 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/T | rs1188399173 | None | 0.981 | N | 0.579 | 0.168 | 0.208000267992 | gnomAD-4.0.0 | 5.1503E-06 | None | None | None | None | N | None | 1.69941E-05 | 3.44222E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 2.85698E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7198 | likely_pathogenic | 0.6018 | pathogenic | -0.17 | Destabilizing | 0.904 | D | 0.481 | neutral | None | None | None | None | N |
K/C | 0.9055 | likely_pathogenic | 0.8424 | pathogenic | -0.444 | Destabilizing | 0.999 | D | 0.703 | prob.delet. | None | None | None | None | N |
K/D | 0.9327 | likely_pathogenic | 0.8766 | pathogenic | 0.273 | Stabilizing | 0.985 | D | 0.611 | neutral | None | None | None | None | N |
K/E | 0.5528 | ambiguous | 0.4105 | ambiguous | 0.33 | Stabilizing | 0.877 | D | 0.417 | neutral | N | 0.434069872 | None | None | N |
K/F | 0.9308 | likely_pathogenic | 0.8825 | pathogenic | -0.167 | Destabilizing | 0.999 | D | 0.656 | prob.neutral | None | None | None | None | N |
K/G | 0.8635 | likely_pathogenic | 0.7581 | pathogenic | -0.428 | Destabilizing | 0.985 | D | 0.482 | neutral | None | None | None | None | N |
K/H | 0.4681 | ambiguous | 0.403 | ambiguous | -0.595 | Destabilizing | 0.996 | D | 0.571 | neutral | None | None | None | None | N |
K/I | 0.5888 | likely_pathogenic | 0.4713 | ambiguous | 0.447 | Stabilizing | 0.981 | D | 0.709 | prob.delet. | N | 0.433963021 | None | None | N |
K/L | 0.6501 | likely_pathogenic | 0.5221 | ambiguous | 0.447 | Stabilizing | 0.971 | D | 0.482 | neutral | None | None | None | None | N |
K/M | 0.4939 | ambiguous | 0.3764 | ambiguous | 0.075 | Stabilizing | 0.999 | D | 0.575 | neutral | None | None | None | None | N |
K/N | 0.8176 | likely_pathogenic | 0.7138 | pathogenic | -0.013 | Destabilizing | 0.961 | D | 0.585 | neutral | N | 0.446914921 | None | None | N |
K/P | 0.9953 | likely_pathogenic | 0.9871 | pathogenic | 0.27 | Stabilizing | 0.995 | D | 0.602 | neutral | None | None | None | None | N |
K/Q | 0.2514 | likely_benign | 0.2049 | benign | -0.092 | Destabilizing | 0.961 | D | 0.592 | neutral | N | 0.434096213 | None | None | N |
K/R | 0.0965 | likely_benign | 0.089 | benign | -0.129 | Destabilizing | 0.022 | N | 0.253 | neutral | N | 0.419827841 | None | None | N |
K/S | 0.7714 | likely_pathogenic | 0.6686 | pathogenic | -0.585 | Destabilizing | 0.904 | D | 0.543 | neutral | None | None | None | None | N |
K/T | 0.3922 | ambiguous | 0.2927 | benign | -0.35 | Destabilizing | 0.981 | D | 0.579 | neutral | N | 0.432276133 | None | None | N |
K/V | 0.5437 | ambiguous | 0.441 | ambiguous | 0.27 | Stabilizing | 0.985 | D | 0.66 | prob.neutral | None | None | None | None | N |
K/W | 0.9383 | likely_pathogenic | 0.8804 | pathogenic | -0.137 | Destabilizing | 0.999 | D | 0.687 | prob.delet. | None | None | None | None | N |
K/Y | 0.8755 | likely_pathogenic | 0.81 | pathogenic | 0.19 | Stabilizing | 0.995 | D | 0.643 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.