Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14015 | 42268;42269;42270 | chr2:178634831;178634830;178634829 | chr2:179499558;179499557;179499556 |
N2AB | 12374 | 37345;37346;37347 | chr2:178634831;178634830;178634829 | chr2:179499558;179499557;179499556 |
N2A | 11447 | 34564;34565;34566 | chr2:178634831;178634830;178634829 | chr2:179499558;179499557;179499556 |
N2B | 4950 | 15073;15074;15075 | chr2:178634831;178634830;178634829 | chr2:179499558;179499557;179499556 |
Novex-1 | 5075 | 15448;15449;15450 | chr2:178634831;178634830;178634829 | chr2:179499558;179499557;179499556 |
Novex-2 | 5142 | 15649;15650;15651 | chr2:178634831;178634830;178634829 | chr2:179499558;179499557;179499556 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs2060226377 | None | 0.297 | N | 0.539 | 0.157 | None | gnomAD-4.0.0 | 1.59968E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86609E-06 | 0 | 0 |
E/V | None | None | 0.857 | N | 0.648 | 0.276 | None | gnomAD-4.0.0 | 1.59987E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86618E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3002 | likely_benign | 0.2151 | benign | -0.138 | Destabilizing | 0.457 | N | 0.511 | neutral | N | 0.505752514 | None | None | N |
E/C | 0.9331 | likely_pathogenic | 0.8822 | pathogenic | -0.207 | Destabilizing | 0.989 | D | 0.81 | deleterious | None | None | None | None | N |
E/D | 0.0978 | likely_benign | 0.0877 | benign | -0.296 | Destabilizing | 0.001 | N | 0.223 | neutral | N | 0.431658693 | None | None | N |
E/F | 0.8744 | likely_pathogenic | 0.7898 | pathogenic | 0.11 | Stabilizing | 0.989 | D | 0.739 | deleterious | None | None | None | None | N |
E/G | 0.4533 | ambiguous | 0.3146 | benign | -0.317 | Destabilizing | 0.457 | N | 0.48 | neutral | N | 0.442463782 | None | None | N |
E/H | 0.7097 | likely_pathogenic | 0.5641 | pathogenic | 0.612 | Stabilizing | 0.968 | D | 0.523 | neutral | None | None | None | None | N |
E/I | 0.4749 | ambiguous | 0.3695 | ambiguous | 0.296 | Stabilizing | 0.888 | D | 0.786 | deleterious | None | None | None | None | N |
E/K | 0.3852 | ambiguous | 0.2708 | benign | 0.504 | Stabilizing | 0.297 | N | 0.539 | neutral | N | 0.442463782 | None | None | N |
E/L | 0.6501 | likely_pathogenic | 0.509 | ambiguous | 0.296 | Stabilizing | 0.888 | D | 0.72 | deleterious | None | None | None | None | N |
E/M | 0.69 | likely_pathogenic | 0.5801 | pathogenic | 0.121 | Stabilizing | 0.989 | D | 0.705 | prob.delet. | None | None | None | None | N |
E/N | 0.3607 | ambiguous | 0.2503 | benign | -0.039 | Destabilizing | 0.662 | D | 0.527 | neutral | None | None | None | None | N |
E/P | 0.946 | likely_pathogenic | 0.8807 | pathogenic | 0.171 | Stabilizing | 0.888 | D | 0.587 | neutral | None | None | None | None | N |
E/Q | 0.3072 | likely_benign | 0.219 | benign | 0.044 | Stabilizing | 0.071 | N | 0.299 | neutral | N | 0.43796103 | None | None | N |
E/R | 0.5762 | likely_pathogenic | 0.4323 | ambiguous | 0.779 | Stabilizing | 0.797 | D | 0.589 | neutral | None | None | None | None | N |
E/S | 0.3088 | likely_benign | 0.2177 | benign | -0.135 | Destabilizing | 0.359 | N | 0.504 | neutral | None | None | None | None | N |
E/T | 0.3789 | ambiguous | 0.2762 | benign | 0.036 | Stabilizing | 0.797 | D | 0.499 | neutral | None | None | None | None | N |
E/V | 0.3044 | likely_benign | 0.2293 | benign | 0.171 | Stabilizing | 0.857 | D | 0.648 | neutral | N | 0.445786696 | None | None | N |
E/W | 0.9602 | likely_pathogenic | 0.9237 | pathogenic | 0.264 | Stabilizing | 0.989 | D | 0.82 | deleterious | None | None | None | None | N |
E/Y | 0.8195 | likely_pathogenic | 0.7005 | pathogenic | 0.363 | Stabilizing | 0.96 | D | 0.709 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.