Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14017 | 42274;42275;42276 | chr2:178634825;178634824;178634823 | chr2:179499552;179499551;179499550 |
N2AB | 12376 | 37351;37352;37353 | chr2:178634825;178634824;178634823 | chr2:179499552;179499551;179499550 |
N2A | 11449 | 34570;34571;34572 | chr2:178634825;178634824;178634823 | chr2:179499552;179499551;179499550 |
N2B | 4952 | 15079;15080;15081 | chr2:178634825;178634824;178634823 | chr2:179499552;179499551;179499550 |
Novex-1 | 5077 | 15454;15455;15456 | chr2:178634825;178634824;178634823 | chr2:179499552;179499551;179499550 |
Novex-2 | 5144 | 15655;15656;15657 | chr2:178634825;178634824;178634823 | chr2:179499552;179499551;179499550 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/R | rs1161979802 | None | 0.034 | N | 0.511 | 0.194 | 0.233785782151 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
G/R | rs1161979802 | None | 0.034 | N | 0.511 | 0.194 | 0.233785782151 | gnomAD-4.0.0 | 2.57034E-06 | None | None | None | None | N | None | 1.69607E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 2.39741E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.3585 | ambiguous | 0.2558 | benign | -0.855 | Destabilizing | 0.919 | D | 0.545 | neutral | N | 0.441258993 | None | None | N |
G/C | 0.5536 | ambiguous | 0.4502 | ambiguous | -1.138 | Destabilizing | 0.999 | D | 0.76 | deleterious | None | None | None | None | N |
G/D | 0.4186 | ambiguous | 0.3528 | ambiguous | -1.443 | Destabilizing | 0.883 | D | 0.705 | prob.delet. | None | None | None | None | N |
G/E | 0.5126 | ambiguous | 0.4119 | ambiguous | -1.521 | Destabilizing | 0.919 | D | 0.679 | prob.neutral | N | 0.426698874 | None | None | N |
G/F | 0.8885 | likely_pathogenic | 0.8224 | pathogenic | -1.246 | Destabilizing | 0.997 | D | 0.767 | deleterious | None | None | None | None | N |
G/H | 0.7301 | likely_pathogenic | 0.5993 | pathogenic | -1.264 | Destabilizing | 0.991 | D | 0.733 | deleterious | None | None | None | None | N |
G/I | 0.7286 | likely_pathogenic | 0.5836 | pathogenic | -0.593 | Destabilizing | 0.997 | D | 0.784 | deleterious | None | None | None | None | N |
G/K | 0.6937 | likely_pathogenic | 0.5335 | ambiguous | -1.286 | Destabilizing | 0.168 | N | 0.543 | neutral | None | None | None | None | N |
G/L | 0.7936 | likely_pathogenic | 0.6667 | pathogenic | -0.593 | Destabilizing | 0.991 | D | 0.668 | prob.neutral | None | None | None | None | N |
G/M | 0.7822 | likely_pathogenic | 0.6408 | pathogenic | -0.521 | Destabilizing | 0.999 | D | 0.757 | deleterious | None | None | None | None | N |
G/N | 0.3765 | ambiguous | 0.2687 | benign | -1.019 | Destabilizing | 0.319 | N | 0.31 | neutral | None | None | None | None | N |
G/P | 0.925 | likely_pathogenic | 0.8647 | pathogenic | -0.642 | Destabilizing | 0.997 | D | 0.761 | deleterious | None | None | None | None | N |
G/Q | 0.5424 | ambiguous | 0.4103 | ambiguous | -1.277 | Destabilizing | 0.981 | D | 0.682 | prob.neutral | None | None | None | None | N |
G/R | 0.5935 | likely_pathogenic | 0.4471 | ambiguous | -0.888 | Destabilizing | 0.034 | N | 0.511 | neutral | N | 0.425628763 | None | None | N |
G/S | 0.208 | likely_benign | 0.146 | benign | -1.249 | Destabilizing | 0.938 | D | 0.587 | neutral | None | None | None | None | N |
G/T | 0.4044 | ambiguous | 0.2457 | benign | -1.26 | Destabilizing | 0.938 | D | 0.697 | prob.delet. | None | None | None | None | N |
G/V | 0.6361 | likely_pathogenic | 0.4793 | ambiguous | -0.642 | Destabilizing | 0.988 | D | 0.736 | deleterious | N | 0.429565586 | None | None | N |
G/W | 0.7938 | likely_pathogenic | 0.7092 | pathogenic | -1.507 | Destabilizing | 0.999 | D | 0.714 | prob.delet. | None | None | None | None | N |
G/Y | 0.797 | likely_pathogenic | 0.7063 | pathogenic | -1.135 | Destabilizing | 0.997 | D | 0.779 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.