Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14028 | 42307;42308;42309 | chr2:178634792;178634791;178634790 | chr2:179499519;179499518;179499517 |
N2AB | 12387 | 37384;37385;37386 | chr2:178634792;178634791;178634790 | chr2:179499519;179499518;179499517 |
N2A | 11460 | 34603;34604;34605 | chr2:178634792;178634791;178634790 | chr2:179499519;179499518;179499517 |
N2B | 4963 | 15112;15113;15114 | chr2:178634792;178634791;178634790 | chr2:179499519;179499518;179499517 |
Novex-1 | 5088 | 15487;15488;15489 | chr2:178634792;178634791;178634790 | chr2:179499519;179499518;179499517 |
Novex-2 | 5155 | 15688;15689;15690 | chr2:178634792;178634791;178634790 | chr2:179499519;179499518;179499517 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/M | rs777098368 | None | 0.993 | N | 0.613 | 0.135 | 0.289098819767 | gnomAD-4.0.0 | 6.84567E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99763E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.5243 | ambiguous | 0.5504 | ambiguous | -1.244 | Destabilizing | 0.929 | D | 0.516 | neutral | None | None | None | None | I |
L/C | 0.902 | likely_pathogenic | 0.9054 | pathogenic | -0.716 | Destabilizing | 1.0 | D | 0.615 | neutral | None | None | None | None | I |
L/D | 0.9385 | likely_pathogenic | 0.9493 | pathogenic | -0.69 | Destabilizing | 0.998 | D | 0.716 | prob.delet. | None | None | None | None | I |
L/E | 0.7122 | likely_pathogenic | 0.751 | pathogenic | -0.749 | Destabilizing | 0.995 | D | 0.672 | prob.neutral | None | None | None | None | I |
L/F | 0.6669 | likely_pathogenic | 0.6644 | pathogenic | -0.99 | Destabilizing | 0.995 | D | 0.591 | neutral | None | None | None | None | I |
L/G | 0.8627 | likely_pathogenic | 0.8763 | pathogenic | -1.488 | Destabilizing | 0.995 | D | 0.693 | prob.delet. | None | None | None | None | I |
L/H | 0.7825 | likely_pathogenic | 0.7934 | pathogenic | -0.705 | Destabilizing | 1.0 | D | 0.723 | deleterious | None | None | None | None | I |
L/I | 0.1613 | likely_benign | 0.158 | benign | -0.687 | Destabilizing | 0.843 | D | 0.528 | neutral | None | None | None | None | I |
L/K | 0.518 | ambiguous | 0.5761 | pathogenic | -0.825 | Destabilizing | 0.995 | D | 0.645 | neutral | None | None | None | None | I |
L/M | 0.2493 | likely_benign | 0.2496 | benign | -0.522 | Destabilizing | 0.993 | D | 0.613 | neutral | N | 0.432679772 | None | None | I |
L/N | 0.7717 | likely_pathogenic | 0.7892 | pathogenic | -0.541 | Destabilizing | 0.998 | D | 0.703 | prob.delet. | None | None | None | None | I |
L/P | 0.5362 | ambiguous | 0.5806 | pathogenic | -0.84 | Destabilizing | 0.998 | D | 0.719 | prob.delet. | N | 0.435532453 | None | None | I |
L/Q | 0.5142 | ambiguous | 0.5522 | ambiguous | -0.788 | Destabilizing | 0.998 | D | 0.649 | prob.neutral | N | 0.449734539 | None | None | I |
L/R | 0.5107 | ambiguous | 0.5569 | ambiguous | -0.183 | Destabilizing | 0.998 | D | 0.665 | prob.neutral | N | 0.445479816 | None | None | I |
L/S | 0.7764 | likely_pathogenic | 0.7918 | pathogenic | -1.061 | Destabilizing | 0.995 | D | 0.645 | neutral | None | None | None | None | I |
L/T | 0.4556 | ambiguous | 0.4549 | ambiguous | -1.014 | Destabilizing | 0.989 | D | 0.68 | prob.neutral | None | None | None | None | I |
L/V | 0.1696 | likely_benign | 0.1571 | benign | -0.84 | Destabilizing | 0.058 | N | 0.228 | neutral | N | 0.43714753 | None | None | I |
L/W | 0.7802 | likely_pathogenic | 0.7894 | pathogenic | -0.999 | Destabilizing | 1.0 | D | 0.664 | prob.neutral | None | None | None | None | I |
L/Y | 0.8452 | likely_pathogenic | 0.8514 | pathogenic | -0.789 | Destabilizing | 0.998 | D | 0.627 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.