Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14029 | 42310;42311;42312 | chr2:178634789;178634788;178634787 | chr2:179499516;179499515;179499514 |
N2AB | 12388 | 37387;37388;37389 | chr2:178634789;178634788;178634787 | chr2:179499516;179499515;179499514 |
N2A | 11461 | 34606;34607;34608 | chr2:178634789;178634788;178634787 | chr2:179499516;179499515;179499514 |
N2B | 4964 | 15115;15116;15117 | chr2:178634789;178634788;178634787 | chr2:179499516;179499515;179499514 |
Novex-1 | 5089 | 15490;15491;15492 | chr2:178634789;178634788;178634787 | chr2:179499516;179499515;179499514 |
Novex-2 | 5156 | 15691;15692;15693 | chr2:178634789;178634788;178634787 | chr2:179499516;179499515;179499514 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | rs794729426 | None | 0.986 | N | 0.785 | 0.384 | 0.227934060464 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 6.56E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
D/N | rs794729426 | None | 0.986 | N | 0.785 | 0.384 | 0.227934060464 | gnomAD-4.0.0 | 5.12963E-06 | None | None | None | None | I | None | 0 | 5.09286E-05 | None | 0 | 0 | None | 0 | 0 | 2.39521E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.6521 | likely_pathogenic | 0.5898 | pathogenic | -0.098 | Destabilizing | 0.986 | D | 0.635 | neutral | N | 0.493882557 | None | None | I |
D/C | 0.9583 | likely_pathogenic | 0.9454 | pathogenic | -0.125 | Destabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | I |
D/E | 0.2879 | likely_benign | 0.2566 | benign | -0.254 | Destabilizing | 0.058 | N | 0.307 | neutral | N | 0.427664945 | None | None | I |
D/F | 0.9432 | likely_pathogenic | 0.9235 | pathogenic | -0.02 | Destabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | I |
D/G | 0.6562 | likely_pathogenic | 0.5934 | pathogenic | -0.27 | Destabilizing | 0.952 | D | 0.733 | deleterious | N | 0.494724665 | None | None | I |
D/H | 0.83 | likely_pathogenic | 0.7458 | pathogenic | 0.428 | Stabilizing | 0.998 | D | 0.757 | deleterious | N | 0.498190772 | None | None | I |
D/I | 0.9006 | likely_pathogenic | 0.8613 | pathogenic | 0.299 | Stabilizing | 0.995 | D | 0.767 | deleterious | None | None | None | None | I |
D/K | 0.938 | likely_pathogenic | 0.8901 | pathogenic | 0.364 | Stabilizing | 0.979 | D | 0.751 | deleterious | None | None | None | None | I |
D/L | 0.8781 | likely_pathogenic | 0.8411 | pathogenic | 0.299 | Stabilizing | 0.989 | D | 0.665 | prob.neutral | None | None | None | None | I |
D/M | 0.9566 | likely_pathogenic | 0.9397 | pathogenic | 0.173 | Stabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | I |
D/N | 0.4248 | ambiguous | 0.3453 | ambiguous | 0.037 | Stabilizing | 0.986 | D | 0.785 | deleterious | N | 0.494724665 | None | None | I |
D/P | 0.9405 | likely_pathogenic | 0.9163 | pathogenic | 0.188 | Stabilizing | 0.995 | D | 0.7 | prob.delet. | None | None | None | None | I |
D/Q | 0.8526 | likely_pathogenic | 0.7861 | pathogenic | 0.069 | Stabilizing | 0.979 | D | 0.725 | deleterious | None | None | None | None | I |
D/R | 0.9437 | likely_pathogenic | 0.9025 | pathogenic | 0.642 | Stabilizing | 0.989 | D | 0.677 | prob.neutral | None | None | None | None | I |
D/S | 0.4968 | ambiguous | 0.427 | ambiguous | -0.069 | Destabilizing | 0.963 | D | 0.689 | prob.delet. | None | None | None | None | I |
D/T | 0.7738 | likely_pathogenic | 0.7239 | pathogenic | 0.07 | Stabilizing | 0.989 | D | 0.738 | deleterious | None | None | None | None | I |
D/V | 0.801 | likely_pathogenic | 0.7387 | pathogenic | 0.188 | Stabilizing | 0.993 | D | 0.663 | prob.neutral | N | 0.49840492 | None | None | I |
D/W | 0.987 | likely_pathogenic | 0.9781 | pathogenic | 0.086 | Stabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | I |
D/Y | 0.7871 | likely_pathogenic | 0.7045 | pathogenic | 0.219 | Stabilizing | 0.999 | D | 0.746 | deleterious | N | 0.49840492 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.