Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14039 | 42340;42341;42342 | chr2:178634759;178634758;178634757 | chr2:179499486;179499485;179499484 |
N2AB | 12398 | 37417;37418;37419 | chr2:178634759;178634758;178634757 | chr2:179499486;179499485;179499484 |
N2A | 11471 | 34636;34637;34638 | chr2:178634759;178634758;178634757 | chr2:179499486;179499485;179499484 |
N2B | 4974 | 15145;15146;15147 | chr2:178634759;178634758;178634757 | chr2:179499486;179499485;179499484 |
Novex-1 | 5099 | 15520;15521;15522 | chr2:178634759;178634758;178634757 | chr2:179499486;179499485;179499484 |
Novex-2 | 5166 | 15721;15722;15723 | chr2:178634759;178634758;178634757 | chr2:179499486;179499485;179499484 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 0.001 | N | 0.397 | 0.057 | 0.170165803431 | gnomAD-4.0.0 | 2.73785E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69921E-06 | 1.16007E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.4407 | ambiguous | 0.324 | benign | -0.809 | Destabilizing | 0.08 | N | 0.513 | neutral | None | None | None | None | I |
L/C | 0.4777 | ambiguous | 0.4847 | ambiguous | -0.701 | Destabilizing | 0.003 | N | 0.478 | neutral | None | None | None | None | I |
L/D | 0.8685 | likely_pathogenic | 0.7732 | pathogenic | -0.514 | Destabilizing | 0.552 | D | 0.783 | deleterious | None | None | None | None | I |
L/E | 0.6231 | likely_pathogenic | 0.4869 | ambiguous | -0.584 | Destabilizing | 0.552 | D | 0.759 | deleterious | None | None | None | None | I |
L/F | 0.2442 | likely_benign | 0.1614 | benign | -0.743 | Destabilizing | 0.001 | N | 0.397 | neutral | N | 0.437061855 | None | None | I |
L/G | 0.5912 | likely_pathogenic | 0.5065 | ambiguous | -0.999 | Destabilizing | 0.378 | N | 0.74 | deleterious | None | None | None | None | I |
L/H | 0.5654 | likely_pathogenic | 0.4043 | ambiguous | -0.225 | Destabilizing | 0.914 | D | 0.776 | deleterious | N | 0.419177713 | None | None | I |
L/I | 0.2817 | likely_benign | 0.1887 | benign | -0.412 | Destabilizing | 0.061 | N | 0.436 | neutral | N | 0.417278044 | None | None | I |
L/K | 0.5606 | ambiguous | 0.4357 | ambiguous | -0.545 | Destabilizing | 0.378 | N | 0.694 | prob.delet. | None | None | None | None | I |
L/M | 0.1978 | likely_benign | 0.1433 | benign | -0.511 | Destabilizing | 0.012 | N | 0.421 | neutral | None | None | None | None | I |
L/N | 0.5881 | likely_pathogenic | 0.4493 | ambiguous | -0.373 | Destabilizing | 0.552 | D | 0.786 | deleterious | None | None | None | None | I |
L/P | 0.8589 | likely_pathogenic | 0.7038 | pathogenic | -0.512 | Destabilizing | 0.739 | D | 0.783 | deleterious | N | 0.419687232 | None | None | I |
L/Q | 0.3699 | ambiguous | 0.2327 | benign | -0.579 | Destabilizing | 0.378 | N | 0.723 | deleterious | None | None | None | None | I |
L/R | 0.5183 | ambiguous | 0.3847 | ambiguous | 0.037 | Stabilizing | 0.314 | N | 0.711 | prob.delet. | N | 0.435468575 | None | None | I |
L/S | 0.5717 | likely_pathogenic | 0.3984 | ambiguous | -0.802 | Destabilizing | 0.378 | N | 0.511 | neutral | None | None | None | None | I |
L/T | 0.5321 | ambiguous | 0.3983 | ambiguous | -0.759 | Destabilizing | 0.378 | N | 0.437 | neutral | None | None | None | None | I |
L/V | 0.2662 | likely_benign | 0.1846 | benign | -0.512 | Destabilizing | 0.061 | N | 0.477 | neutral | N | 0.431222318 | None | None | I |
L/W | 0.5593 | ambiguous | 0.4243 | ambiguous | -0.77 | Destabilizing | 0.823 | D | 0.775 | deleterious | None | None | None | None | I |
L/Y | 0.5328 | ambiguous | 0.4218 | ambiguous | -0.53 | Destabilizing | 0.233 | N | 0.489 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.