Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14040 | 42343;42344;42345 | chr2:178634756;178634755;178634754 | chr2:179499483;179499482;179499481 |
N2AB | 12399 | 37420;37421;37422 | chr2:178634756;178634755;178634754 | chr2:179499483;179499482;179499481 |
N2A | 11472 | 34639;34640;34641 | chr2:178634756;178634755;178634754 | chr2:179499483;179499482;179499481 |
N2B | 4975 | 15148;15149;15150 | chr2:178634756;178634755;178634754 | chr2:179499483;179499482;179499481 |
Novex-1 | 5100 | 15523;15524;15525 | chr2:178634756;178634755;178634754 | chr2:179499483;179499482;179499481 |
Novex-2 | 5167 | 15724;15725;15726 | chr2:178634756;178634755;178634754 | chr2:179499483;179499482;179499481 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/Y | rs2154228320 | None | 1.0 | D | 0.723 | 0.584 | 0.578910049572 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07211E-04 | 0 |
N/Y | rs2154228320 | None | 1.0 | D | 0.723 | 0.584 | 0.578910049572 | gnomAD-4.0.0 | 6.57056E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.07383E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.9081 | likely_pathogenic | 0.869 | pathogenic | -0.149 | Destabilizing | 0.999 | D | 0.641 | neutral | None | None | None | None | I |
N/C | 0.9122 | likely_pathogenic | 0.9157 | pathogenic | 0.264 | Stabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | I |
N/D | 0.4023 | ambiguous | 0.3565 | ambiguous | 0.22 | Stabilizing | 0.997 | D | 0.696 | prob.delet. | N | 0.454019298 | None | None | I |
N/E | 0.9263 | likely_pathogenic | 0.8961 | pathogenic | 0.178 | Stabilizing | 0.998 | D | 0.744 | deleterious | None | None | None | None | I |
N/F | 0.9821 | likely_pathogenic | 0.9787 | pathogenic | -0.624 | Destabilizing | 1.0 | D | 0.733 | deleterious | None | None | None | None | I |
N/G | 0.6015 | likely_pathogenic | 0.5363 | ambiguous | -0.292 | Destabilizing | 0.998 | D | 0.617 | neutral | None | None | None | None | I |
N/H | 0.5291 | ambiguous | 0.5064 | ambiguous | -0.292 | Destabilizing | 0.999 | D | 0.769 | deleterious | D | 0.561382528 | None | None | I |
N/I | 0.9809 | likely_pathogenic | 0.9745 | pathogenic | 0.133 | Stabilizing | 0.999 | D | 0.751 | deleterious | D | 0.563200792 | None | None | I |
N/K | 0.9512 | likely_pathogenic | 0.921 | pathogenic | 0.143 | Stabilizing | 0.999 | D | 0.747 | deleterious | N | 0.448982031 | None | None | I |
N/L | 0.9381 | likely_pathogenic | 0.9228 | pathogenic | 0.133 | Stabilizing | 0.999 | D | 0.678 | prob.neutral | None | None | None | None | I |
N/M | 0.9644 | likely_pathogenic | 0.9569 | pathogenic | 0.225 | Stabilizing | 1.0 | D | 0.732 | deleterious | None | None | None | None | I |
N/P | 0.9567 | likely_pathogenic | 0.9489 | pathogenic | 0.065 | Stabilizing | 0.999 | D | 0.709 | prob.delet. | None | None | None | None | I |
N/Q | 0.9177 | likely_pathogenic | 0.8861 | pathogenic | -0.24 | Destabilizing | 0.999 | D | 0.71 | prob.delet. | None | None | None | None | I |
N/R | 0.9457 | likely_pathogenic | 0.9166 | pathogenic | 0.183 | Stabilizing | 0.999 | D | 0.721 | deleterious | None | None | None | None | I |
N/S | 0.2997 | likely_benign | 0.2637 | benign | -0.044 | Destabilizing | 0.997 | D | 0.627 | neutral | N | 0.514339533 | None | None | I |
N/T | 0.7058 | likely_pathogenic | 0.6418 | pathogenic | 0.047 | Stabilizing | 0.997 | D | 0.738 | deleterious | N | 0.493852362 | None | None | I |
N/V | 0.9713 | likely_pathogenic | 0.9613 | pathogenic | 0.065 | Stabilizing | 0.999 | D | 0.683 | prob.neutral | None | None | None | None | I |
N/W | 0.9914 | likely_pathogenic | 0.9916 | pathogenic | -0.699 | Destabilizing | 1.0 | D | 0.704 | prob.delet. | None | None | None | None | I |
N/Y | 0.8415 | likely_pathogenic | 0.8167 | pathogenic | -0.388 | Destabilizing | 1.0 | D | 0.723 | deleterious | D | 0.562138348 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.