Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14048 | 42367;42368;42369 | chr2:178634732;178634731;178634730 | chr2:179499459;179499458;179499457 |
N2AB | 12407 | 37444;37445;37446 | chr2:178634732;178634731;178634730 | chr2:179499459;179499458;179499457 |
N2A | 11480 | 34663;34664;34665 | chr2:178634732;178634731;178634730 | chr2:179499459;179499458;179499457 |
N2B | 4983 | 15172;15173;15174 | chr2:178634732;178634731;178634730 | chr2:179499459;179499458;179499457 |
Novex-1 | 5108 | 15547;15548;15549 | chr2:178634732;178634731;178634730 | chr2:179499459;179499458;179499457 |
Novex-2 | 5175 | 15748;15749;15750 | chr2:178634732;178634731;178634730 | chr2:179499459;179499458;179499457 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1362774927 | 0.145 | 0.524 | N | 0.369 | 0.229 | 0.227260227426 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 2.91E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/I | rs1362774927 | 0.145 | 0.524 | N | 0.369 | 0.229 | 0.227260227426 | gnomAD-4.0.0 | 1.59287E-06 | None | None | None | None | N | None | 0 | 2.28927E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.3618 | ambiguous | 0.2633 | benign | -0.792 | Destabilizing | 0.688 | D | 0.354 | neutral | N | 0.473143168 | None | None | N |
T/C | 0.867 | likely_pathogenic | 0.8079 | pathogenic | -0.558 | Destabilizing | 0.998 | D | 0.331 | neutral | None | None | None | None | N |
T/D | 0.8355 | likely_pathogenic | 0.7373 | pathogenic | 0.002 | Stabilizing | 0.994 | D | 0.375 | neutral | None | None | None | None | N |
T/E | 0.658 | likely_pathogenic | 0.5506 | ambiguous | 0.019 | Stabilizing | 0.994 | D | 0.38 | neutral | None | None | None | None | N |
T/F | 0.7329 | likely_pathogenic | 0.5765 | pathogenic | -0.78 | Destabilizing | 0.022 | N | 0.384 | neutral | None | None | None | None | N |
T/G | 0.7994 | likely_pathogenic | 0.6803 | pathogenic | -1.066 | Destabilizing | 0.978 | D | 0.466 | neutral | None | None | None | None | N |
T/H | 0.4716 | ambiguous | 0.3325 | benign | -1.313 | Destabilizing | 0.998 | D | 0.498 | neutral | None | None | None | None | N |
T/I | 0.5825 | likely_pathogenic | 0.468 | ambiguous | -0.153 | Destabilizing | 0.524 | D | 0.369 | neutral | N | 0.431176558 | None | None | N |
T/K | 0.494 | ambiguous | 0.355 | ambiguous | -0.664 | Destabilizing | 0.971 | D | 0.368 | neutral | N | 0.440243959 | None | None | N |
T/L | 0.3877 | ambiguous | 0.299 | benign | -0.153 | Destabilizing | 0.009 | N | 0.221 | neutral | None | None | None | None | N |
T/M | 0.2578 | likely_benign | 0.1956 | benign | 0.003 | Stabilizing | 0.961 | D | 0.333 | neutral | None | None | None | None | N |
T/N | 0.3208 | likely_benign | 0.2214 | benign | -0.621 | Destabilizing | 0.994 | D | 0.374 | neutral | None | None | None | None | N |
T/P | 0.9488 | likely_pathogenic | 0.9016 | pathogenic | -0.333 | Destabilizing | 0.991 | D | 0.374 | neutral | N | 0.475745362 | None | None | N |
T/Q | 0.4182 | ambiguous | 0.3229 | benign | -0.742 | Destabilizing | 0.994 | D | 0.385 | neutral | None | None | None | None | N |
T/R | 0.4616 | ambiguous | 0.319 | benign | -0.506 | Destabilizing | 0.991 | D | 0.369 | neutral | N | 0.439881978 | None | None | N |
T/S | 0.3667 | ambiguous | 0.2609 | benign | -0.949 | Destabilizing | 0.915 | D | 0.439 | neutral | N | 0.472378188 | None | None | N |
T/V | 0.4264 | ambiguous | 0.3529 | ambiguous | -0.333 | Destabilizing | 0.087 | N | 0.122 | neutral | None | None | None | None | N |
T/W | 0.917 | likely_pathogenic | 0.8477 | pathogenic | -0.703 | Destabilizing | 0.998 | D | 0.526 | neutral | None | None | None | None | N |
T/Y | 0.708 | likely_pathogenic | 0.5478 | ambiguous | -0.468 | Destabilizing | 0.925 | D | 0.527 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.