Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14059 | 42400;42401;42402 | chr2:178634606;178634605;178634604 | chr2:179499333;179499332;179499331 |
N2AB | 12418 | 37477;37478;37479 | chr2:178634606;178634605;178634604 | chr2:179499333;179499332;179499331 |
N2A | 11491 | 34696;34697;34698 | chr2:178634606;178634605;178634604 | chr2:179499333;179499332;179499331 |
N2B | 4994 | 15205;15206;15207 | chr2:178634606;178634605;178634604 | chr2:179499333;179499332;179499331 |
Novex-1 | 5119 | 15580;15581;15582 | chr2:178634606;178634605;178634604 | chr2:179499333;179499332;179499331 |
Novex-2 | 5186 | 15781;15782;15783 | chr2:178634606;178634605;178634604 | chr2:179499333;179499332;179499331 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/H | rs1173536699 | -0.652 | 1.0 | D | 0.744 | 0.425 | 0.68313252318 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 1.14837E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
P/H | rs1173536699 | -0.652 | 1.0 | D | 0.744 | 0.425 | 0.68313252318 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.42E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/H | rs1173536699 | -0.652 | 1.0 | D | 0.744 | 0.425 | 0.68313252318 | gnomAD-4.0.0 | 6.58241E-06 | None | None | None | None | N | None | 2.41756E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/L | rs1173536699 | -0.182 | 0.999 | N | 0.803 | 0.395 | 0.778299035629 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 6.51042E-04 | None | 0 | None | 0 | 0 | 0 |
P/L | rs1173536699 | -0.182 | 0.999 | N | 0.803 | 0.395 | 0.778299035629 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.93798E-04 | None | 0 | 0 | 0 | 0 | 0 |
P/L | rs1173536699 | -0.182 | 0.999 | N | 0.803 | 0.395 | 0.778299035629 | gnomAD-4.0.0 | 6.58241E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.93798E-04 | None | 0 | 0 | 0 | 0 | 0 |
P/S | None | None | 0.999 | D | 0.771 | 0.428 | 0.478980160563 | gnomAD-4.0.0 | 2.05327E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99685E-07 | 2.31981E-05 | 0 |
P/T | None | None | 0.999 | D | 0.794 | 0.393 | 0.619752075125 | gnomAD-4.0.0 | 2.05327E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69906E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1634 | likely_benign | 0.1571 | benign | -1.052 | Destabilizing | 0.996 | D | 0.711 | prob.delet. | D | 0.564340692 | None | None | N |
P/C | 0.8548 | likely_pathogenic | 0.85 | pathogenic | -0.582 | Destabilizing | 1.0 | D | 0.744 | deleterious | None | None | None | None | N |
P/D | 0.729 | likely_pathogenic | 0.7243 | pathogenic | -0.593 | Destabilizing | 0.999 | D | 0.777 | deleterious | None | None | None | None | N |
P/E | 0.4784 | ambiguous | 0.4867 | ambiguous | -0.602 | Destabilizing | 0.994 | D | 0.741 | deleterious | None | None | None | None | N |
P/F | 0.8617 | likely_pathogenic | 0.8511 | pathogenic | -0.751 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
P/G | 0.6085 | likely_pathogenic | 0.6089 | pathogenic | -1.342 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
P/H | 0.5019 | ambiguous | 0.4794 | ambiguous | -0.816 | Destabilizing | 1.0 | D | 0.744 | deleterious | D | 0.568681982 | None | None | N |
P/I | 0.7443 | likely_pathogenic | 0.704 | pathogenic | -0.374 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
P/K | 0.621 | likely_pathogenic | 0.5783 | pathogenic | -0.81 | Destabilizing | 0.998 | D | 0.77 | deleterious | None | None | None | None | N |
P/L | 0.3409 | ambiguous | 0.3128 | benign | -0.374 | Destabilizing | 0.999 | D | 0.803 | deleterious | N | 0.508897311 | None | None | N |
P/M | 0.7016 | likely_pathogenic | 0.6726 | pathogenic | -0.318 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
P/N | 0.684 | likely_pathogenic | 0.6606 | pathogenic | -0.578 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | N |
P/Q | 0.3632 | ambiguous | 0.3439 | ambiguous | -0.72 | Destabilizing | 0.985 | D | 0.438 | neutral | None | None | None | None | N |
P/R | 0.4608 | ambiguous | 0.4324 | ambiguous | -0.344 | Destabilizing | 0.999 | D | 0.791 | deleterious | N | 0.504034864 | None | None | N |
P/S | 0.2967 | likely_benign | 0.2878 | benign | -1.092 | Destabilizing | 0.999 | D | 0.771 | deleterious | D | 0.585233177 | None | None | N |
P/T | 0.307 | likely_benign | 0.2783 | benign | -0.99 | Destabilizing | 0.999 | D | 0.794 | deleterious | D | 0.528298738 | None | None | N |
P/V | 0.5891 | likely_pathogenic | 0.5421 | ambiguous | -0.564 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
P/W | 0.943 | likely_pathogenic | 0.9384 | pathogenic | -0.934 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
P/Y | 0.8372 | likely_pathogenic | 0.8181 | pathogenic | -0.623 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.