Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14061 | 42406;42407;42408 | chr2:178634600;178634599;178634598 | chr2:179499327;179499326;179499325 |
N2AB | 12420 | 37483;37484;37485 | chr2:178634600;178634599;178634598 | chr2:179499327;179499326;179499325 |
N2A | 11493 | 34702;34703;34704 | chr2:178634600;178634599;178634598 | chr2:179499327;179499326;179499325 |
N2B | 4996 | 15211;15212;15213 | chr2:178634600;178634599;178634598 | chr2:179499327;179499326;179499325 |
Novex-1 | 5121 | 15586;15587;15588 | chr2:178634600;178634599;178634598 | chr2:179499327;179499326;179499325 |
Novex-2 | 5188 | 15787;15788;15789 | chr2:178634600;178634599;178634598 | chr2:179499327;179499326;179499325 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/M | None | None | 0.976 | D | 0.655 | 0.569 | 0.557365556891 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4876 | ambiguous | 0.5381 | ambiguous | -0.04 | Destabilizing | 0.399 | N | 0.561 | neutral | None | None | None | None | N |
K/C | 0.8611 | likely_pathogenic | 0.86 | pathogenic | -0.347 | Destabilizing | 0.982 | D | 0.687 | prob.neutral | None | None | None | None | N |
K/D | 0.7425 | likely_pathogenic | 0.7714 | pathogenic | -0.003 | Destabilizing | 0.7 | D | 0.681 | prob.neutral | None | None | None | None | N |
K/E | 0.2012 | likely_benign | 0.2448 | benign | 0.05 | Stabilizing | 0.201 | N | 0.527 | neutral | N | 0.493507113 | None | None | N |
K/F | 0.9218 | likely_pathogenic | 0.9362 | pathogenic | -0.017 | Destabilizing | 0.947 | D | 0.665 | neutral | None | None | None | None | N |
K/G | 0.6358 | likely_pathogenic | 0.6404 | pathogenic | -0.298 | Destabilizing | 0.7 | D | 0.539 | neutral | None | None | None | None | N |
K/H | 0.4569 | ambiguous | 0.482 | ambiguous | -0.492 | Destabilizing | 0.947 | D | 0.664 | neutral | None | None | None | None | N |
K/I | 0.5732 | likely_pathogenic | 0.6543 | pathogenic | 0.579 | Stabilizing | 0.826 | D | 0.695 | prob.neutral | None | None | None | None | N |
K/L | 0.5493 | ambiguous | 0.5973 | pathogenic | 0.579 | Stabilizing | 0.7 | D | 0.539 | neutral | None | None | None | None | N |
K/M | 0.3916 | ambiguous | 0.4574 | ambiguous | 0.112 | Stabilizing | 0.976 | D | 0.655 | neutral | D | 0.59703418 | None | None | N |
K/N | 0.5543 | ambiguous | 0.6071 | pathogenic | -0.03 | Destabilizing | 0.638 | D | 0.654 | neutral | D | 0.543654392 | None | None | N |
K/P | 0.8786 | likely_pathogenic | 0.8984 | pathogenic | 0.402 | Stabilizing | 0.826 | D | 0.699 | prob.neutral | None | None | None | None | N |
K/Q | 0.1561 | likely_benign | 0.1796 | benign | -0.095 | Destabilizing | 0.638 | D | 0.658 | neutral | N | 0.497327958 | None | None | N |
K/R | 0.1029 | likely_benign | 0.1077 | benign | -0.195 | Destabilizing | 0.002 | N | 0.225 | neutral | N | 0.497226076 | None | None | N |
K/S | 0.5616 | ambiguous | 0.6083 | pathogenic | -0.483 | Destabilizing | 0.399 | N | 0.593 | neutral | None | None | None | None | N |
K/T | 0.2419 | likely_benign | 0.3179 | benign | -0.262 | Destabilizing | 0.638 | D | 0.63 | neutral | N | 0.518077105 | None | None | N |
K/V | 0.5172 | ambiguous | 0.5956 | pathogenic | 0.402 | Stabilizing | 0.7 | D | 0.649 | neutral | None | None | None | None | N |
K/W | 0.9153 | likely_pathogenic | 0.9238 | pathogenic | -0.047 | Destabilizing | 0.982 | D | 0.697 | prob.neutral | None | None | None | None | N |
K/Y | 0.85 | likely_pathogenic | 0.8678 | pathogenic | 0.28 | Stabilizing | 0.826 | D | 0.658 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.