Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14063 | 42412;42413;42414 | chr2:178634594;178634593;178634592 | chr2:179499321;179499320;179499319 |
N2AB | 12422 | 37489;37490;37491 | chr2:178634594;178634593;178634592 | chr2:179499321;179499320;179499319 |
N2A | 11495 | 34708;34709;34710 | chr2:178634594;178634593;178634592 | chr2:179499321;179499320;179499319 |
N2B | 4998 | 15217;15218;15219 | chr2:178634594;178634593;178634592 | chr2:179499321;179499320;179499319 |
Novex-1 | 5123 | 15592;15593;15594 | chr2:178634594;178634593;178634592 | chr2:179499321;179499320;179499319 |
Novex-2 | 5190 | 15793;15794;15795 | chr2:178634594;178634593;178634592 | chr2:179499321;179499320;179499319 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs772758022 | -1.448 | 0.989 | D | 0.443 | 0.463 | 0.676012115908 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
V/A | rs772758022 | -1.448 | 0.989 | D | 0.443 | 0.463 | 0.676012115908 | gnomAD-4.0.0 | 3.18445E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.72037E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5856 | likely_pathogenic | 0.5388 | ambiguous | -1.37 | Destabilizing | 0.989 | D | 0.443 | neutral | D | 0.540625622 | None | None | N |
V/C | 0.9451 | likely_pathogenic | 0.9189 | pathogenic | -0.734 | Destabilizing | 1.0 | D | 0.526 | neutral | None | None | None | None | N |
V/D | 0.9019 | likely_pathogenic | 0.8806 | pathogenic | -1.515 | Destabilizing | 0.997 | D | 0.677 | prob.neutral | D | 0.690643495 | None | None | N |
V/E | 0.7115 | likely_pathogenic | 0.6833 | pathogenic | -1.386 | Destabilizing | 0.995 | D | 0.574 | neutral | None | None | None | None | N |
V/F | 0.6185 | likely_pathogenic | 0.5848 | pathogenic | -0.828 | Destabilizing | 0.998 | D | 0.551 | neutral | D | 0.650213858 | None | None | N |
V/G | 0.8117 | likely_pathogenic | 0.7791 | pathogenic | -1.808 | Destabilizing | 0.998 | D | 0.654 | neutral | D | 0.689945481 | None | None | N |
V/H | 0.9452 | likely_pathogenic | 0.9397 | pathogenic | -1.546 | Destabilizing | 1.0 | D | 0.67 | neutral | None | None | None | None | N |
V/I | 0.0902 | likely_benign | 0.0883 | benign | -0.211 | Destabilizing | 0.543 | D | 0.319 | neutral | N | 0.519733244 | None | None | N |
V/K | 0.7816 | likely_pathogenic | 0.7684 | pathogenic | -1.078 | Destabilizing | 0.995 | D | 0.572 | neutral | None | None | None | None | N |
V/L | 0.5769 | likely_pathogenic | 0.5208 | ambiguous | -0.211 | Destabilizing | 0.948 | D | 0.414 | neutral | N | 0.505314127 | None | None | N |
V/M | 0.3024 | likely_benign | 0.2879 | benign | -0.131 | Destabilizing | 0.999 | D | 0.46 | neutral | None | None | None | None | N |
V/N | 0.8119 | likely_pathogenic | 0.7865 | pathogenic | -1.161 | Destabilizing | 0.999 | D | 0.691 | prob.neutral | None | None | None | None | N |
V/P | 0.9938 | likely_pathogenic | 0.9938 | pathogenic | -0.564 | Destabilizing | 1.0 | D | 0.629 | neutral | None | None | None | None | N |
V/Q | 0.7224 | likely_pathogenic | 0.7078 | pathogenic | -1.124 | Destabilizing | 0.96 | D | 0.399 | neutral | None | None | None | None | N |
V/R | 0.7729 | likely_pathogenic | 0.7607 | pathogenic | -0.842 | Destabilizing | 0.998 | D | 0.688 | prob.neutral | None | None | None | None | N |
V/S | 0.7582 | likely_pathogenic | 0.7343 | pathogenic | -1.724 | Destabilizing | 0.998 | D | 0.567 | neutral | None | None | None | None | N |
V/T | 0.4865 | ambiguous | 0.4561 | ambiguous | -1.47 | Destabilizing | 0.996 | D | 0.443 | neutral | None | None | None | None | N |
V/W | 0.9893 | likely_pathogenic | 0.9868 | pathogenic | -1.285 | Destabilizing | 1.0 | D | 0.65 | neutral | None | None | None | None | N |
V/Y | 0.9364 | likely_pathogenic | 0.9233 | pathogenic | -0.839 | Destabilizing | 1.0 | D | 0.556 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.