Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14070 | 42433;42434;42435 | chr2:178634573;178634572;178634571 | chr2:179499300;179499299;179499298 |
N2AB | 12429 | 37510;37511;37512 | chr2:178634573;178634572;178634571 | chr2:179499300;179499299;179499298 |
N2A | 11502 | 34729;34730;34731 | chr2:178634573;178634572;178634571 | chr2:179499300;179499299;179499298 |
N2B | 5005 | 15238;15239;15240 | chr2:178634573;178634572;178634571 | chr2:179499300;179499299;179499298 |
Novex-1 | 5130 | 15613;15614;15615 | chr2:178634573;178634572;178634571 | chr2:179499300;179499299;179499298 |
Novex-2 | 5197 | 15814;15815;15816 | chr2:178634573;178634572;178634571 | chr2:179499300;179499299;179499298 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/K | None | None | 0.997 | N | 0.424 | 0.372 | 0.246773566709 | gnomAD-4.0.0 | 1.59226E-06 | None | None | None | None | N | None | 0 | 2.28739E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.3516 | ambiguous | 0.4043 | ambiguous | -0.397 | Destabilizing | 0.997 | D | 0.471 | neutral | None | None | None | None | N |
Q/C | 0.9617 | likely_pathogenic | 0.9703 | pathogenic | 0.133 | Stabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
Q/D | 0.7907 | likely_pathogenic | 0.8415 | pathogenic | -0.022 | Destabilizing | 0.997 | D | 0.48 | neutral | None | None | None | None | N |
Q/E | 0.1482 | likely_benign | 0.1743 | benign | 0.002 | Stabilizing | 0.992 | D | 0.345 | neutral | N | 0.443785211 | None | None | N |
Q/F | 0.9499 | likely_pathogenic | 0.9565 | pathogenic | -0.314 | Destabilizing | 0.999 | D | 0.753 | deleterious | None | None | None | None | N |
Q/G | 0.617 | likely_pathogenic | 0.6868 | pathogenic | -0.67 | Destabilizing | 0.997 | D | 0.556 | neutral | None | None | None | None | N |
Q/H | 0.7346 | likely_pathogenic | 0.792 | pathogenic | -0.512 | Destabilizing | 0.999 | D | 0.593 | neutral | N | 0.505602222 | None | None | N |
Q/I | 0.7262 | likely_pathogenic | 0.7475 | pathogenic | 0.258 | Stabilizing | 0.999 | D | 0.759 | deleterious | None | None | None | None | N |
Q/K | 0.2415 | likely_benign | 0.3265 | benign | -0.106 | Destabilizing | 0.997 | D | 0.424 | neutral | N | 0.445520629 | None | None | N |
Q/L | 0.4344 | ambiguous | 0.5082 | ambiguous | 0.258 | Stabilizing | 0.997 | D | 0.556 | neutral | N | 0.433104957 | None | None | N |
Q/M | 0.6081 | likely_pathogenic | 0.6323 | pathogenic | 0.572 | Stabilizing | 0.999 | D | 0.593 | neutral | None | None | None | None | N |
Q/N | 0.6544 | likely_pathogenic | 0.7061 | pathogenic | -0.495 | Destabilizing | 0.999 | D | 0.566 | neutral | None | None | None | None | N |
Q/P | 0.2444 | likely_benign | 0.3554 | ambiguous | 0.071 | Stabilizing | 0.999 | D | 0.691 | prob.neutral | N | 0.443551738 | None | None | N |
Q/R | 0.3355 | likely_benign | 0.4248 | ambiguous | 0.026 | Stabilizing | 0.997 | D | 0.464 | neutral | N | 0.437659854 | None | None | N |
Q/S | 0.4739 | ambiguous | 0.5228 | ambiguous | -0.555 | Destabilizing | 0.997 | D | 0.436 | neutral | None | None | None | None | N |
Q/T | 0.4128 | ambiguous | 0.4667 | ambiguous | -0.352 | Destabilizing | 0.999 | D | 0.621 | neutral | None | None | None | None | N |
Q/V | 0.5666 | likely_pathogenic | 0.5917 | pathogenic | 0.071 | Stabilizing | 0.999 | D | 0.614 | neutral | None | None | None | None | N |
Q/W | 0.942 | likely_pathogenic | 0.9587 | pathogenic | -0.218 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
Q/Y | 0.9176 | likely_pathogenic | 0.9402 | pathogenic | -0.004 | Destabilizing | 0.999 | D | 0.691 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.