Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14080 | 42463;42464;42465 | chr2:178634543;178634542;178634541 | chr2:179499270;179499269;179499268 |
N2AB | 12439 | 37540;37541;37542 | chr2:178634543;178634542;178634541 | chr2:179499270;179499269;179499268 |
N2A | 11512 | 34759;34760;34761 | chr2:178634543;178634542;178634541 | chr2:179499270;179499269;179499268 |
N2B | 5015 | 15268;15269;15270 | chr2:178634543;178634542;178634541 | chr2:179499270;179499269;179499268 |
Novex-1 | 5140 | 15643;15644;15645 | chr2:178634543;178634542;178634541 | chr2:179499270;179499269;179499268 |
Novex-2 | 5207 | 15844;15845;15846 | chr2:178634543;178634542;178634541 | chr2:179499270;179499269;179499268 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1002712823 | None | 0.92 | N | 0.501 | 0.345 | 0.435590266561 | gnomAD-4.0.0 | 1.5922E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85999E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3542 | ambiguous | 0.3678 | ambiguous | -0.337 | Destabilizing | 0.826 | D | 0.541 | neutral | N | 0.50518827 | None | None | N |
E/C | 0.9829 | likely_pathogenic | 0.9847 | pathogenic | -0.153 | Destabilizing | 0.999 | D | 0.685 | prob.neutral | None | None | None | None | N |
E/D | 0.2114 | likely_benign | 0.1746 | benign | -0.391 | Destabilizing | 0.015 | N | 0.219 | neutral | N | 0.442132062 | None | None | N |
E/F | 0.9674 | likely_pathogenic | 0.9669 | pathogenic | -0.13 | Destabilizing | 0.997 | D | 0.641 | neutral | None | None | None | None | N |
E/G | 0.4343 | ambiguous | 0.4578 | ambiguous | -0.546 | Destabilizing | 0.015 | N | 0.397 | neutral | N | 0.512730978 | None | None | N |
E/H | 0.8811 | likely_pathogenic | 0.8768 | pathogenic | 0.195 | Stabilizing | 0.997 | D | 0.501 | neutral | None | None | None | None | N |
E/I | 0.8147 | likely_pathogenic | 0.8157 | pathogenic | 0.185 | Stabilizing | 0.997 | D | 0.635 | neutral | None | None | None | None | N |
E/K | 0.4753 | ambiguous | 0.5263 | ambiguous | 0.273 | Stabilizing | 0.92 | D | 0.501 | neutral | N | 0.511101515 | None | None | N |
E/L | 0.8135 | likely_pathogenic | 0.8139 | pathogenic | 0.185 | Stabilizing | 0.991 | D | 0.591 | neutral | None | None | None | None | N |
E/M | 0.8416 | likely_pathogenic | 0.8477 | pathogenic | 0.168 | Stabilizing | 0.999 | D | 0.634 | neutral | None | None | None | None | N |
E/N | 0.5914 | likely_pathogenic | 0.5442 | ambiguous | -0.088 | Destabilizing | 0.939 | D | 0.49 | neutral | None | None | None | None | N |
E/P | 0.6475 | likely_pathogenic | 0.631 | pathogenic | 0.032 | Stabilizing | 0.997 | D | 0.531 | neutral | None | None | None | None | N |
E/Q | 0.4058 | ambiguous | 0.4098 | ambiguous | -0.046 | Destabilizing | 0.959 | D | 0.507 | neutral | D | 0.599026593 | None | None | N |
E/R | 0.6969 | likely_pathogenic | 0.727 | pathogenic | 0.568 | Stabilizing | 0.991 | D | 0.491 | neutral | None | None | None | None | N |
E/S | 0.5104 | ambiguous | 0.4872 | ambiguous | -0.258 | Destabilizing | 0.939 | D | 0.444 | neutral | None | None | None | None | N |
E/T | 0.5594 | ambiguous | 0.5498 | ambiguous | -0.086 | Destabilizing | 0.969 | D | 0.552 | neutral | None | None | None | None | N |
E/V | 0.5873 | likely_pathogenic | 0.5929 | pathogenic | 0.032 | Stabilizing | 0.996 | D | 0.573 | neutral | D | 0.531045246 | None | None | N |
E/W | 0.9895 | likely_pathogenic | 0.9902 | pathogenic | 0.038 | Stabilizing | 0.999 | D | 0.698 | prob.neutral | None | None | None | None | N |
E/Y | 0.9309 | likely_pathogenic | 0.9297 | pathogenic | 0.122 | Stabilizing | 0.997 | D | 0.626 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.