Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14093 | 42502;42503;42504 | chr2:178634504;178634503;178634502 | chr2:179499231;179499230;179499229 |
N2AB | 12452 | 37579;37580;37581 | chr2:178634504;178634503;178634502 | chr2:179499231;179499230;179499229 |
N2A | 11525 | 34798;34799;34800 | chr2:178634504;178634503;178634502 | chr2:179499231;179499230;179499229 |
N2B | 5028 | 15307;15308;15309 | chr2:178634504;178634503;178634502 | chr2:179499231;179499230;179499229 |
Novex-1 | 5153 | 15682;15683;15684 | chr2:178634504;178634503;178634502 | chr2:179499231;179499230;179499229 |
Novex-2 | 5220 | 15883;15884;15885 | chr2:178634504;178634503;178634502 | chr2:179499231;179499230;179499229 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs2060181153 | None | 0.98 | N | 0.516 | 0.28 | 0.213573922156 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/N | rs2060181153 | None | 0.98 | N | 0.516 | 0.28 | 0.213573922156 | gnomAD-4.0.0 | 6.84398E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99648E-07 | 0 | 0 |
K/R | rs1553743733 | None | 0.98 | N | 0.536 | 0.242 | 0.315903272564 | gnomAD-4.0.0 | 1.5922E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86005E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.449 | ambiguous | 0.4705 | ambiguous | -0.064 | Destabilizing | 0.931 | D | 0.573 | neutral | None | None | None | None | I |
K/C | 0.8398 | likely_pathogenic | 0.8189 | pathogenic | -0.647 | Destabilizing | 1.0 | D | 0.618 | neutral | None | None | None | None | I |
K/D | 0.733 | likely_pathogenic | 0.7497 | pathogenic | -0.163 | Destabilizing | 0.985 | D | 0.529 | neutral | None | None | None | None | I |
K/E | 0.266 | likely_benign | 0.2925 | benign | -0.155 | Destabilizing | 0.98 | D | 0.587 | neutral | N | 0.457408525 | None | None | I |
K/F | 0.8639 | likely_pathogenic | 0.864 | pathogenic | -0.4 | Destabilizing | 0.999 | D | 0.62 | neutral | None | None | None | None | I |
K/G | 0.5997 | likely_pathogenic | 0.6234 | pathogenic | -0.201 | Destabilizing | 0.985 | D | 0.551 | neutral | None | None | None | None | I |
K/H | 0.3876 | ambiguous | 0.3718 | ambiguous | -0.257 | Destabilizing | 1.0 | D | 0.549 | neutral | None | None | None | None | I |
K/I | 0.5197 | ambiguous | 0.5388 | ambiguous | 0.215 | Stabilizing | 0.991 | D | 0.61 | neutral | None | None | None | None | I |
K/L | 0.5006 | ambiguous | 0.5005 | ambiguous | 0.215 | Stabilizing | 0.97 | D | 0.562 | neutral | None | None | None | None | I |
K/M | 0.3952 | ambiguous | 0.4044 | ambiguous | -0.235 | Destabilizing | 1.0 | D | 0.547 | neutral | D | 0.606095449 | None | None | I |
K/N | 0.5328 | ambiguous | 0.5632 | ambiguous | -0.232 | Destabilizing | 0.98 | D | 0.516 | neutral | N | 0.508426336 | None | None | I |
K/P | 0.6721 | likely_pathogenic | 0.6823 | pathogenic | 0.145 | Stabilizing | 0.999 | D | 0.503 | neutral | None | None | None | None | I |
K/Q | 0.1635 | likely_benign | 0.1633 | benign | -0.295 | Destabilizing | 0.998 | D | 0.516 | neutral | N | 0.496696274 | None | None | I |
K/R | 0.1065 | likely_benign | 0.1058 | benign | -0.167 | Destabilizing | 0.98 | D | 0.536 | neutral | N | 0.492105614 | None | None | I |
K/S | 0.5065 | ambiguous | 0.526 | ambiguous | -0.6 | Destabilizing | 0.871 | D | 0.567 | neutral | None | None | None | None | I |
K/T | 0.2012 | likely_benign | 0.2094 | benign | -0.462 | Destabilizing | 0.122 | N | 0.319 | neutral | N | 0.424245405 | None | None | I |
K/V | 0.4861 | ambiguous | 0.4926 | ambiguous | 0.145 | Stabilizing | 0.97 | D | 0.555 | neutral | None | None | None | None | I |
K/W | 0.8925 | likely_pathogenic | 0.8911 | pathogenic | -0.522 | Destabilizing | 1.0 | D | 0.653 | neutral | None | None | None | None | I |
K/Y | 0.7767 | likely_pathogenic | 0.7679 | pathogenic | -0.162 | Destabilizing | 0.999 | D | 0.588 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.