Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14100 | 42523;42524;42525 | chr2:178634483;178634482;178634481 | chr2:179499210;179499209;179499208 |
N2AB | 12459 | 37600;37601;37602 | chr2:178634483;178634482;178634481 | chr2:179499210;179499209;179499208 |
N2A | 11532 | 34819;34820;34821 | chr2:178634483;178634482;178634481 | chr2:179499210;179499209;179499208 |
N2B | 5035 | 15328;15329;15330 | chr2:178634483;178634482;178634481 | chr2:179499210;179499209;179499208 |
Novex-1 | 5160 | 15703;15704;15705 | chr2:178634483;178634482;178634481 | chr2:179499210;179499209;179499208 |
Novex-2 | 5227 | 15904;15905;15906 | chr2:178634483;178634482;178634481 | chr2:179499210;179499209;179499208 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs1228652507 | -1.04 | 0.953 | N | 0.329 | 0.158 | 0.636416215821 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
I/V | rs1228652507 | -1.04 | 0.953 | N | 0.329 | 0.158 | 0.636416215821 | gnomAD-4.0.0 | 1.59232E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43336E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.7302 | likely_pathogenic | 0.7675 | pathogenic | -2.047 | Highly Destabilizing | 0.985 | D | 0.54 | neutral | None | None | None | None | N |
I/C | 0.8843 | likely_pathogenic | 0.9072 | pathogenic | -1.281 | Destabilizing | 1.0 | D | 0.598 | neutral | None | None | None | None | N |
I/D | 0.9492 | likely_pathogenic | 0.9421 | pathogenic | -1.579 | Destabilizing | 0.998 | D | 0.678 | prob.neutral | None | None | None | None | N |
I/E | 0.8871 | likely_pathogenic | 0.8666 | pathogenic | -1.459 | Destabilizing | 0.998 | D | 0.681 | prob.neutral | None | None | None | None | N |
I/F | 0.4129 | ambiguous | 0.3794 | ambiguous | -1.244 | Destabilizing | 0.135 | N | 0.254 | neutral | D | 0.541084893 | None | None | N |
I/G | 0.9373 | likely_pathogenic | 0.9461 | pathogenic | -2.497 | Highly Destabilizing | 0.998 | D | 0.649 | neutral | None | None | None | None | N |
I/H | 0.869 | likely_pathogenic | 0.8475 | pathogenic | -1.708 | Destabilizing | 1.0 | D | 0.69 | prob.neutral | None | None | None | None | N |
I/K | 0.7768 | likely_pathogenic | 0.734 | pathogenic | -1.445 | Destabilizing | 0.998 | D | 0.68 | prob.neutral | None | None | None | None | N |
I/L | 0.2248 | likely_benign | 0.2223 | benign | -0.818 | Destabilizing | 0.817 | D | 0.317 | neutral | N | 0.510594613 | None | None | N |
I/M | 0.1582 | likely_benign | 0.1556 | benign | -0.671 | Destabilizing | 0.999 | D | 0.561 | neutral | N | 0.51544648 | None | None | N |
I/N | 0.6714 | likely_pathogenic | 0.6429 | pathogenic | -1.48 | Destabilizing | 0.997 | D | 0.689 | prob.neutral | D | 0.729268122 | None | None | N |
I/P | 0.9782 | likely_pathogenic | 0.9777 | pathogenic | -1.201 | Destabilizing | 0.999 | D | 0.699 | prob.neutral | None | None | None | None | N |
I/Q | 0.8103 | likely_pathogenic | 0.7784 | pathogenic | -1.493 | Destabilizing | 0.999 | D | 0.699 | prob.neutral | None | None | None | None | N |
I/R | 0.6992 | likely_pathogenic | 0.6639 | pathogenic | -1.002 | Destabilizing | 0.998 | D | 0.697 | prob.neutral | None | None | None | None | N |
I/S | 0.6855 | likely_pathogenic | 0.7104 | pathogenic | -2.203 | Highly Destabilizing | 0.961 | D | 0.601 | neutral | D | 0.667029826 | None | None | N |
I/T | 0.4395 | ambiguous | 0.4831 | ambiguous | -1.944 | Destabilizing | 0.4 | N | 0.284 | neutral | D | 0.609982464 | None | None | N |
I/V | 0.1166 | likely_benign | 0.1365 | benign | -1.201 | Destabilizing | 0.953 | D | 0.329 | neutral | N | 0.495272043 | None | None | N |
I/W | 0.9426 | likely_pathogenic | 0.9415 | pathogenic | -1.443 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | N |
I/Y | 0.7892 | likely_pathogenic | 0.779 | pathogenic | -1.175 | Destabilizing | 0.991 | D | 0.584 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.