Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14105 | 42538;42539;42540 | chr2:178634468;178634467;178634466 | chr2:179499195;179499194;179499193 |
N2AB | 12464 | 37615;37616;37617 | chr2:178634468;178634467;178634466 | chr2:179499195;179499194;179499193 |
N2A | 11537 | 34834;34835;34836 | chr2:178634468;178634467;178634466 | chr2:179499195;179499194;179499193 |
N2B | 5040 | 15343;15344;15345 | chr2:178634468;178634467;178634466 | chr2:179499195;179499194;179499193 |
Novex-1 | 5165 | 15718;15719;15720 | chr2:178634468;178634467;178634466 | chr2:179499195;179499194;179499193 |
Novex-2 | 5232 | 15919;15920;15921 | chr2:178634468;178634467;178634466 | chr2:179499195;179499194;179499193 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.606 | N | 0.273 | 0.214 | 0.272205846399 | gnomAD-4.0.0 | 6.84438E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.52461E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.8334 | likely_pathogenic | 0.8692 | pathogenic | -0.498 | Destabilizing | 0.993 | D | 0.661 | neutral | None | None | None | None | N |
K/C | 0.9242 | likely_pathogenic | 0.9351 | pathogenic | -0.586 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
K/D | 0.9096 | likely_pathogenic | 0.915 | pathogenic | -0.099 | Destabilizing | 0.991 | D | 0.623 | neutral | None | None | None | None | N |
K/E | 0.6538 | likely_pathogenic | 0.6513 | pathogenic | 0.001 | Stabilizing | 0.98 | D | 0.639 | neutral | N | 0.507134781 | None | None | N |
K/F | 0.9605 | likely_pathogenic | 0.9697 | pathogenic | -0.19 | Destabilizing | 0.996 | D | 0.719 | prob.delet. | None | None | None | None | N |
K/G | 0.8286 | likely_pathogenic | 0.8499 | pathogenic | -0.857 | Destabilizing | 0.985 | D | 0.649 | neutral | None | None | None | None | N |
K/H | 0.7158 | likely_pathogenic | 0.7148 | pathogenic | -1.17 | Destabilizing | 0.999 | D | 0.651 | neutral | None | None | None | None | N |
K/I | 0.8096 | likely_pathogenic | 0.8492 | pathogenic | 0.425 | Stabilizing | 0.991 | D | 0.701 | prob.neutral | None | None | None | None | N |
K/L | 0.7244 | likely_pathogenic | 0.7768 | pathogenic | 0.425 | Stabilizing | 0.171 | N | 0.445 | neutral | None | None | None | None | N |
K/M | 0.5925 | likely_pathogenic | 0.6028 | pathogenic | 0.275 | Stabilizing | 0.994 | D | 0.658 | neutral | D | 0.592785735 | None | None | N |
K/N | 0.7531 | likely_pathogenic | 0.7769 | pathogenic | -0.457 | Destabilizing | 0.606 | D | 0.273 | neutral | N | 0.509286937 | None | None | N |
K/P | 0.8989 | likely_pathogenic | 0.9347 | pathogenic | 0.148 | Stabilizing | 0.999 | D | 0.666 | neutral | None | None | None | None | N |
K/Q | 0.3747 | ambiguous | 0.3508 | ambiguous | -0.546 | Destabilizing | 0.997 | D | 0.649 | neutral | N | 0.510047206 | None | None | N |
K/R | 0.1395 | likely_benign | 0.1343 | benign | -0.607 | Destabilizing | 0.99 | D | 0.579 | neutral | N | 0.495392752 | None | None | N |
K/S | 0.838 | likely_pathogenic | 0.8603 | pathogenic | -1.11 | Destabilizing | 0.985 | D | 0.616 | neutral | None | None | None | None | N |
K/T | 0.5579 | ambiguous | 0.5867 | pathogenic | -0.81 | Destabilizing | 0.98 | D | 0.63 | neutral | N | 0.507334499 | None | None | N |
K/V | 0.7816 | likely_pathogenic | 0.8278 | pathogenic | 0.148 | Stabilizing | 0.971 | D | 0.637 | neutral | None | None | None | None | N |
K/W | 0.9567 | likely_pathogenic | 0.9549 | pathogenic | -0.065 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
K/Y | 0.9102 | likely_pathogenic | 0.9165 | pathogenic | 0.223 | Stabilizing | 0.999 | D | 0.711 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.