Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14113 | 42562;42563;42564 | chr2:178634444;178634443;178634442 | chr2:179499171;179499170;179499169 |
N2AB | 12472 | 37639;37640;37641 | chr2:178634444;178634443;178634442 | chr2:179499171;179499170;179499169 |
N2A | 11545 | 34858;34859;34860 | chr2:178634444;178634443;178634442 | chr2:179499171;179499170;179499169 |
N2B | 5048 | 15367;15368;15369 | chr2:178634444;178634443;178634442 | chr2:179499171;179499170;179499169 |
Novex-1 | 5173 | 15742;15743;15744 | chr2:178634444;178634443;178634442 | chr2:179499171;179499170;179499169 |
Novex-2 | 5240 | 15943;15944;15945 | chr2:178634444;178634443;178634442 | chr2:179499171;179499170;179499169 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | None | None | 0.012 | N | 0.277 | 0.069 | 0.101711395817 | gnomAD-4.0.0 | 1.59261E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86046E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.3446 | ambiguous | 0.2566 | benign | -0.092 | Destabilizing | 0.012 | N | 0.357 | neutral | N | 0.441336854 | None | None | N |
D/C | 0.7804 | likely_pathogenic | 0.6143 | pathogenic | 0.143 | Stabilizing | None | N | 0.244 | neutral | None | None | None | None | N |
D/E | 0.2756 | likely_benign | 0.2433 | benign | -0.573 | Destabilizing | 0.012 | N | 0.277 | neutral | N | 0.453534179 | None | None | N |
D/F | 0.7643 | likely_pathogenic | 0.6509 | pathogenic | -0.431 | Destabilizing | 0.356 | N | 0.486 | neutral | None | None | None | None | N |
D/G | 0.2725 | likely_benign | 0.1961 | benign | -0.335 | Destabilizing | 0.012 | N | 0.298 | neutral | N | 0.454835669 | None | None | N |
D/H | 0.3667 | ambiguous | 0.2493 | benign | -0.826 | Destabilizing | None | N | 0.171 | neutral | N | 0.460084552 | None | None | N |
D/I | 0.7379 | likely_pathogenic | 0.6444 | pathogenic | 0.505 | Stabilizing | 0.356 | N | 0.493 | neutral | None | None | None | None | N |
D/K | 0.5548 | ambiguous | 0.39 | ambiguous | -0.105 | Destabilizing | 0.038 | N | 0.335 | neutral | None | None | None | None | N |
D/L | 0.6714 | likely_pathogenic | 0.5608 | ambiguous | 0.505 | Stabilizing | 0.072 | N | 0.443 | neutral | None | None | None | None | N |
D/M | 0.8384 | likely_pathogenic | 0.781 | pathogenic | 0.912 | Stabilizing | 0.864 | D | 0.446 | neutral | None | None | None | None | N |
D/N | 0.0924 | likely_benign | 0.0741 | benign | -0.245 | Destabilizing | None | N | 0.085 | neutral | N | 0.425413419 | None | None | N |
D/P | 0.9665 | likely_pathogenic | 0.9483 | pathogenic | 0.331 | Stabilizing | 0.356 | N | 0.412 | neutral | None | None | None | None | N |
D/Q | 0.4713 | ambiguous | 0.3862 | ambiguous | -0.184 | Destabilizing | 0.214 | N | 0.326 | neutral | None | None | None | None | N |
D/R | 0.5316 | ambiguous | 0.3987 | ambiguous | -0.187 | Destabilizing | 0.214 | N | 0.466 | neutral | None | None | None | None | N |
D/S | 0.1741 | likely_benign | 0.126 | benign | -0.405 | Destabilizing | 0.003 | N | 0.176 | neutral | None | None | None | None | N |
D/T | 0.4883 | ambiguous | 0.3793 | ambiguous | -0.225 | Destabilizing | 0.038 | N | 0.307 | neutral | None | None | None | None | N |
D/V | 0.58 | likely_pathogenic | 0.4927 | ambiguous | 0.331 | Stabilizing | 0.055 | N | 0.473 | neutral | D | 0.581268067 | None | None | N |
D/W | 0.9471 | likely_pathogenic | 0.9147 | pathogenic | -0.528 | Destabilizing | 0.864 | D | 0.499 | neutral | None | None | None | None | N |
D/Y | 0.3361 | likely_benign | 0.2288 | benign | -0.274 | Destabilizing | 0.093 | N | 0.507 | neutral | D | 0.581106766 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.