Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14115 | 42568;42569;42570 | chr2:178634438;178634437;178634436 | chr2:179499165;179499164;179499163 |
N2AB | 12474 | 37645;37646;37647 | chr2:178634438;178634437;178634436 | chr2:179499165;179499164;179499163 |
N2A | 11547 | 34864;34865;34866 | chr2:178634438;178634437;178634436 | chr2:179499165;179499164;179499163 |
N2B | 5050 | 15373;15374;15375 | chr2:178634438;178634437;178634436 | chr2:179499165;179499164;179499163 |
Novex-1 | 5175 | 15748;15749;15750 | chr2:178634438;178634437;178634436 | chr2:179499165;179499164;179499163 |
Novex-2 | 5242 | 15949;15950;15951 | chr2:178634438;178634437;178634436 | chr2:179499165;179499164;179499163 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/E | rs2060169705 | None | None | N | 0.099 | 0.145 | 0.24896430686 | gnomAD-4.0.0 | 1.5927E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86048E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2219 | likely_benign | 0.2108 | benign | -0.675 | Destabilizing | None | N | 0.139 | neutral | None | None | None | None | N |
Q/C | 0.6968 | likely_pathogenic | 0.5282 | ambiguous | 0.014 | Stabilizing | 0.864 | D | 0.301 | neutral | None | None | None | None | N |
Q/D | 0.4919 | ambiguous | 0.4119 | ambiguous | -0.671 | Destabilizing | 0.016 | N | 0.147 | neutral | None | None | None | None | N |
Q/E | 0.121 | likely_benign | 0.1007 | benign | -0.576 | Destabilizing | None | N | 0.099 | neutral | N | 0.410139094 | None | None | N |
Q/F | 0.7528 | likely_pathogenic | 0.6421 | pathogenic | -0.45 | Destabilizing | 0.214 | N | 0.355 | neutral | None | None | None | None | N |
Q/G | 0.3232 | likely_benign | 0.2968 | benign | -1.033 | Destabilizing | 0.016 | N | 0.303 | neutral | None | None | None | None | N |
Q/H | 0.2877 | likely_benign | 0.1879 | benign | -0.962 | Destabilizing | None | N | 0.152 | neutral | N | 0.491324728 | None | None | N |
Q/I | 0.533 | ambiguous | 0.4086 | ambiguous | 0.236 | Stabilizing | 0.038 | N | 0.372 | neutral | None | None | None | None | N |
Q/K | 0.1086 | likely_benign | 0.0929 | benign | -0.373 | Destabilizing | 0.012 | N | 0.177 | neutral | N | 0.458175275 | None | None | N |
Q/L | 0.19 | likely_benign | 0.1304 | benign | 0.236 | Stabilizing | 0.012 | N | 0.321 | neutral | N | 0.48065576 | None | None | N |
Q/M | 0.4173 | ambiguous | 0.3684 | ambiguous | 0.798 | Stabilizing | 0.356 | N | 0.262 | neutral | None | None | None | None | N |
Q/N | 0.3053 | likely_benign | 0.2551 | benign | -0.947 | Destabilizing | 0.038 | N | 0.147 | neutral | None | None | None | None | N |
Q/P | 0.6759 | likely_pathogenic | 0.5867 | pathogenic | -0.036 | Destabilizing | 0.106 | N | 0.37 | neutral | N | 0.511629959 | None | None | N |
Q/R | 0.1238 | likely_benign | 0.0939 | benign | -0.331 | Destabilizing | None | N | 0.137 | neutral | N | 0.396525808 | None | None | N |
Q/S | 0.2236 | likely_benign | 0.2191 | benign | -1.017 | Destabilizing | 0.016 | N | 0.191 | neutral | None | None | None | None | N |
Q/T | 0.2002 | likely_benign | 0.1813 | benign | -0.721 | Destabilizing | 0.031 | N | 0.291 | neutral | None | None | None | None | N |
Q/V | 0.3169 | likely_benign | 0.2558 | benign | -0.036 | Destabilizing | 0.001 | N | 0.185 | neutral | None | None | None | None | N |
Q/W | 0.7601 | likely_pathogenic | 0.6236 | pathogenic | -0.346 | Destabilizing | 0.864 | D | 0.308 | neutral | None | None | None | None | N |
Q/Y | 0.583 | likely_pathogenic | 0.4463 | ambiguous | -0.117 | Destabilizing | 0.12 | N | 0.372 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.