Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14116 | 42571;42572;42573 | chr2:178634435;178634434;178634433 | chr2:179499162;179499161;179499160 |
N2AB | 12475 | 37648;37649;37650 | chr2:178634435;178634434;178634433 | chr2:179499162;179499161;179499160 |
N2A | 11548 | 34867;34868;34869 | chr2:178634435;178634434;178634433 | chr2:179499162;179499161;179499160 |
N2B | 5051 | 15376;15377;15378 | chr2:178634435;178634434;178634433 | chr2:179499162;179499161;179499160 |
Novex-1 | 5176 | 15751;15752;15753 | chr2:178634435;178634434;178634433 | chr2:179499162;179499161;179499160 |
Novex-2 | 5243 | 15952;15953;15954 | chr2:178634435;178634434;178634433 | chr2:179499162;179499161;179499160 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | 0.999 | N | 0.461 | 0.365 | 0.21737058555 | gnomAD-4.0.0 | 1.59277E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.78164E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9013 | likely_pathogenic | 0.7236 | pathogenic | -1.418 | Destabilizing | 1.0 | D | 0.562 | neutral | None | None | None | None | I |
F/C | 0.8841 | likely_pathogenic | 0.7471 | pathogenic | -0.329 | Destabilizing | 1.0 | D | 0.669 | neutral | N | 0.517888626 | None | None | I |
F/D | 0.9594 | likely_pathogenic | 0.8863 | pathogenic | 0.254 | Stabilizing | 1.0 | D | 0.712 | prob.delet. | None | None | None | None | I |
F/E | 0.961 | likely_pathogenic | 0.8974 | pathogenic | 0.241 | Stabilizing | 1.0 | D | 0.704 | prob.neutral | None | None | None | None | I |
F/G | 0.9645 | likely_pathogenic | 0.8971 | pathogenic | -1.659 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | I |
F/H | 0.8887 | likely_pathogenic | 0.787 | pathogenic | -0.215 | Destabilizing | 1.0 | D | 0.672 | neutral | None | None | None | None | I |
F/I | 0.673 | likely_pathogenic | 0.4629 | ambiguous | -0.768 | Destabilizing | 1.0 | D | 0.597 | neutral | N | 0.443411675 | None | None | I |
F/K | 0.9682 | likely_pathogenic | 0.9102 | pathogenic | -0.313 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | I |
F/L | 0.9559 | likely_pathogenic | 0.905 | pathogenic | -0.768 | Destabilizing | 0.999 | D | 0.461 | neutral | N | 0.434958331 | None | None | I |
F/M | 0.8304 | likely_pathogenic | 0.685 | pathogenic | -0.47 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | I |
F/N | 0.9089 | likely_pathogenic | 0.7963 | pathogenic | -0.114 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | I |
F/P | 0.979 | likely_pathogenic | 0.9278 | pathogenic | -0.968 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | I |
F/Q | 0.9548 | likely_pathogenic | 0.8903 | pathogenic | -0.262 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | I |
F/R | 0.9431 | likely_pathogenic | 0.8645 | pathogenic | 0.282 | Stabilizing | 1.0 | D | 0.708 | prob.delet. | None | None | None | None | I |
F/S | 0.8857 | likely_pathogenic | 0.6963 | pathogenic | -0.845 | Destabilizing | 1.0 | D | 0.651 | neutral | N | 0.440309261 | None | None | I |
F/T | 0.913 | likely_pathogenic | 0.7577 | pathogenic | -0.766 | Destabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | I |
F/V | 0.7129 | likely_pathogenic | 0.5104 | ambiguous | -0.968 | Destabilizing | 1.0 | D | 0.587 | neutral | N | 0.444284681 | None | None | I |
F/W | 0.6906 | likely_pathogenic | 0.591 | pathogenic | -0.51 | Destabilizing | 1.0 | D | 0.645 | neutral | None | None | None | None | I |
F/Y | 0.3091 | likely_benign | 0.2302 | benign | -0.509 | Destabilizing | 0.999 | D | 0.463 | neutral | N | 0.445614709 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.