Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14117 | 42574;42575;42576 | chr2:178634432;178634431;178634430 | chr2:179499159;179499158;179499157 |
N2AB | 12476 | 37651;37652;37653 | chr2:178634432;178634431;178634430 | chr2:179499159;179499158;179499157 |
N2A | 11549 | 34870;34871;34872 | chr2:178634432;178634431;178634430 | chr2:179499159;179499158;179499157 |
N2B | 5052 | 15379;15380;15381 | chr2:178634432;178634431;178634430 | chr2:179499159;179499158;179499157 |
Novex-1 | 5177 | 15754;15755;15756 | chr2:178634432;178634431;178634430 | chr2:179499159;179499158;179499157 |
Novex-2 | 5244 | 15955;15956;15957 | chr2:178634432;178634431;178634430 | chr2:179499159;179499158;179499157 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/V | rs2060168886 | None | 0.942 | N | 0.637 | 0.172 | 0.313818047136 | gnomAD-4.0.0 | 1.23209E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.61947E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.2851 | likely_benign | 0.16 | benign | -0.024 | Destabilizing | 0.698 | D | 0.453 | neutral | N | 0.450182824 | None | None | N |
D/C | 0.8165 | likely_pathogenic | 0.6379 | pathogenic | -0.011 | Destabilizing | 0.998 | D | 0.689 | prob.neutral | None | None | None | None | N |
D/E | 0.2299 | likely_benign | 0.1536 | benign | -0.227 | Destabilizing | 0.058 | N | 0.247 | neutral | N | 0.400477859 | None | None | N |
D/F | 0.7847 | likely_pathogenic | 0.6304 | pathogenic | -0.084 | Destabilizing | 0.978 | D | 0.651 | neutral | None | None | None | None | N |
D/G | 0.2962 | likely_benign | 0.17 | benign | -0.159 | Destabilizing | 0.698 | D | 0.452 | neutral | N | 0.440227003 | None | None | N |
D/H | 0.4542 | ambiguous | 0.3038 | benign | 0.387 | Stabilizing | 0.992 | D | 0.468 | neutral | N | 0.465465983 | None | None | N |
D/I | 0.6073 | likely_pathogenic | 0.386 | ambiguous | 0.266 | Stabilizing | 0.978 | D | 0.655 | neutral | None | None | None | None | N |
D/K | 0.5483 | ambiguous | 0.3449 | ambiguous | 0.465 | Stabilizing | 0.86 | D | 0.435 | neutral | None | None | None | None | N |
D/L | 0.5793 | likely_pathogenic | 0.376 | ambiguous | 0.266 | Stabilizing | 0.956 | D | 0.633 | neutral | None | None | None | None | N |
D/M | 0.8055 | likely_pathogenic | 0.6325 | pathogenic | 0.175 | Stabilizing | 0.998 | D | 0.655 | neutral | None | None | None | None | N |
D/N | 0.1572 | likely_benign | 0.1004 | benign | 0.226 | Stabilizing | 0.032 | N | 0.235 | neutral | N | 0.459005896 | None | None | N |
D/P | 0.8684 | likely_pathogenic | 0.7202 | pathogenic | 0.19 | Stabilizing | 0.978 | D | 0.46 | neutral | None | None | None | None | N |
D/Q | 0.5022 | ambiguous | 0.3377 | benign | 0.239 | Stabilizing | 0.956 | D | 0.403 | neutral | None | None | None | None | N |
D/R | 0.565 | likely_pathogenic | 0.3984 | ambiguous | 0.662 | Stabilizing | 0.956 | D | 0.587 | neutral | None | None | None | None | N |
D/S | 0.1747 | likely_benign | 0.1076 | benign | 0.124 | Stabilizing | 0.16 | N | 0.231 | neutral | None | None | None | None | N |
D/T | 0.3976 | ambiguous | 0.2396 | benign | 0.234 | Stabilizing | 0.754 | D | 0.434 | neutral | None | None | None | None | N |
D/V | 0.4354 | ambiguous | 0.256 | benign | 0.19 | Stabilizing | 0.942 | D | 0.637 | neutral | N | 0.485553859 | None | None | N |
D/W | 0.9352 | likely_pathogenic | 0.869 | pathogenic | -0.026 | Destabilizing | 0.998 | D | 0.71 | prob.delet. | None | None | None | None | N |
D/Y | 0.4423 | ambiguous | 0.2885 | benign | 0.145 | Stabilizing | 0.99 | D | 0.652 | neutral | D | 0.580560376 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.