Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14120 | 42583;42584;42585 | chr2:178634423;178634422;178634421 | chr2:179499150;179499149;179499148 |
N2AB | 12479 | 37660;37661;37662 | chr2:178634423;178634422;178634421 | chr2:179499150;179499149;179499148 |
N2A | 11552 | 34879;34880;34881 | chr2:178634423;178634422;178634421 | chr2:179499150;179499149;179499148 |
N2B | 5055 | 15388;15389;15390 | chr2:178634423;178634422;178634421 | chr2:179499150;179499149;179499148 |
Novex-1 | 5180 | 15763;15764;15765 | chr2:178634423;178634422;178634421 | chr2:179499150;179499149;179499148 |
Novex-2 | 5247 | 15964;15965;15966 | chr2:178634423;178634422;178634421 | chr2:179499150;179499149;179499148 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/R | None | None | 0.017 | D | 0.686 | 0.658 | 0.726914830792 | gnomAD-4.0.0 | 6.8451E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99703E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.3979 | ambiguous | 0.365 | ambiguous | 0.01 | Stabilizing | 0.003 | N | 0.431 | neutral | D | 0.541477845 | None | None | N |
G/C | 0.8205 | likely_pathogenic | 0.7483 | pathogenic | 0.02 | Stabilizing | 0.991 | D | 0.793 | deleterious | None | None | None | None | N |
G/D | 0.6616 | likely_pathogenic | 0.4596 | ambiguous | -0.849 | Destabilizing | 0.004 | N | 0.563 | neutral | None | None | None | None | N |
G/E | 0.8804 | likely_pathogenic | 0.7855 | pathogenic | -0.708 | Destabilizing | 0.338 | N | 0.779 | deleterious | D | 0.706155056 | None | None | N |
G/F | 0.9839 | likely_pathogenic | 0.9786 | pathogenic | -0.161 | Destabilizing | 0.906 | D | 0.81 | deleterious | None | None | None | None | N |
G/H | 0.9811 | likely_pathogenic | 0.9539 | pathogenic | -1.208 | Destabilizing | 0.973 | D | 0.797 | deleterious | None | None | None | None | N |
G/I | 0.9691 | likely_pathogenic | 0.9537 | pathogenic | 0.976 | Stabilizing | 0.826 | D | 0.805 | deleterious | None | None | None | None | N |
G/K | 0.9818 | likely_pathogenic | 0.9588 | pathogenic | -0.296 | Destabilizing | 0.704 | D | 0.78 | deleterious | None | None | None | None | N |
G/L | 0.9658 | likely_pathogenic | 0.9488 | pathogenic | 0.976 | Stabilizing | 0.826 | D | 0.788 | deleterious | None | None | None | None | N |
G/M | 0.9652 | likely_pathogenic | 0.9466 | pathogenic | 0.761 | Stabilizing | 0.991 | D | 0.799 | deleterious | None | None | None | None | N |
G/N | 0.8754 | likely_pathogenic | 0.7591 | pathogenic | -0.409 | Destabilizing | 0.826 | D | 0.711 | prob.delet. | None | None | None | None | N |
G/P | 0.9988 | likely_pathogenic | 0.9979 | pathogenic | 0.701 | Stabilizing | 0.906 | D | 0.791 | deleterious | None | None | None | None | N |
G/Q | 0.9526 | likely_pathogenic | 0.9126 | pathogenic | -0.238 | Destabilizing | 0.826 | D | 0.789 | deleterious | None | None | None | None | N |
G/R | 0.9645 | likely_pathogenic | 0.9272 | pathogenic | -0.58 | Destabilizing | 0.017 | N | 0.686 | prob.neutral | D | 0.743778939 | None | None | N |
G/S | 0.4517 | ambiguous | 0.3391 | benign | -0.74 | Destabilizing | 0.404 | N | 0.661 | neutral | None | None | None | None | N |
G/T | 0.831 | likely_pathogenic | 0.7658 | pathogenic | -0.476 | Destabilizing | 0.826 | D | 0.777 | deleterious | None | None | None | None | N |
G/V | 0.922 | likely_pathogenic | 0.8842 | pathogenic | 0.701 | Stabilizing | 0.642 | D | 0.795 | deleterious | D | 0.706155056 | None | None | N |
G/W | 0.9782 | likely_pathogenic | 0.9593 | pathogenic | -0.998 | Destabilizing | 0.988 | D | 0.753 | deleterious | D | 0.743246431 | None | None | N |
G/Y | 0.9724 | likely_pathogenic | 0.9521 | pathogenic | -0.242 | Destabilizing | 0.973 | D | 0.813 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.