Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14121 | 42586;42587;42588 | chr2:178634420;178634419;178634418 | chr2:179499147;179499146;179499145 |
N2AB | 12480 | 37663;37664;37665 | chr2:178634420;178634419;178634418 | chr2:179499147;179499146;179499145 |
N2A | 11553 | 34882;34883;34884 | chr2:178634420;178634419;178634418 | chr2:179499147;179499146;179499145 |
N2B | 5056 | 15391;15392;15393 | chr2:178634420;178634419;178634418 | chr2:179499147;179499146;179499145 |
Novex-1 | 5181 | 15766;15767;15768 | chr2:178634420;178634419;178634418 | chr2:179499147;179499146;179499145 |
Novex-2 | 5248 | 15967;15968;15969 | chr2:178634420;178634419;178634418 | chr2:179499147;179499146;179499145 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.244 | N | 0.281 | 0.186 | 0.601974941769 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
V/F | None | None | 0.006 | N | 0.249 | 0.244 | 0.776660857837 | gnomAD-4.0.0 | 6.3716E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.58192E-06 | 1.43332E-05 | 0 |
V/G | None | None | 0.425 | D | 0.406 | 0.319 | 0.827173928948 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1602 | likely_benign | 0.1657 | benign | -1.265 | Destabilizing | 0.244 | N | 0.281 | neutral | N | 0.508927476 | None | None | I |
V/C | 0.6968 | likely_pathogenic | 0.6636 | pathogenic | -0.98 | Destabilizing | 0.995 | D | 0.458 | neutral | None | None | None | None | I |
V/D | 0.1517 | likely_benign | 0.1448 | benign | -0.427 | Destabilizing | 0.002 | N | 0.392 | neutral | N | 0.477807057 | None | None | I |
V/E | 0.1175 | likely_benign | 0.1325 | benign | -0.428 | Destabilizing | 0.001 | N | 0.27 | neutral | None | None | None | None | I |
V/F | 0.1504 | likely_benign | 0.1231 | benign | -0.992 | Destabilizing | 0.006 | N | 0.249 | neutral | N | 0.506025056 | None | None | I |
V/G | 0.2279 | likely_benign | 0.2364 | benign | -1.567 | Destabilizing | 0.425 | N | 0.406 | neutral | D | 0.549872353 | None | None | I |
V/H | 0.4453 | ambiguous | 0.4558 | ambiguous | -0.996 | Destabilizing | 0.944 | D | 0.519 | neutral | None | None | None | None | I |
V/I | 0.0652 | likely_benign | 0.0661 | benign | -0.55 | Destabilizing | 0.27 | N | 0.405 | neutral | N | 0.481875953 | None | None | I |
V/K | 0.262 | likely_benign | 0.2773 | benign | -0.77 | Destabilizing | 0.329 | N | 0.353 | neutral | None | None | None | None | I |
V/L | 0.1306 | likely_benign | 0.1267 | benign | -0.55 | Destabilizing | 0.27 | N | 0.328 | neutral | N | 0.494708491 | None | None | I |
V/M | 0.1099 | likely_benign | 0.1135 | benign | -0.524 | Destabilizing | 0.944 | D | 0.468 | neutral | None | None | None | None | I |
V/N | 0.1334 | likely_benign | 0.1317 | benign | -0.577 | Destabilizing | 0.704 | D | 0.459 | neutral | None | None | None | None | I |
V/P | 0.5515 | ambiguous | 0.5041 | ambiguous | -0.752 | Destabilizing | 0.828 | D | 0.493 | neutral | None | None | None | None | I |
V/Q | 0.2088 | likely_benign | 0.2357 | benign | -0.723 | Destabilizing | 0.085 | N | 0.325 | neutral | None | None | None | None | I |
V/R | 0.2857 | likely_benign | 0.295 | benign | -0.354 | Destabilizing | 0.704 | D | 0.484 | neutral | None | None | None | None | I |
V/S | 0.1564 | likely_benign | 0.1603 | benign | -1.23 | Destabilizing | 0.495 | N | 0.355 | neutral | None | None | None | None | I |
V/T | 0.119 | likely_benign | 0.1301 | benign | -1.109 | Destabilizing | 0.495 | N | 0.386 | neutral | None | None | None | None | I |
V/W | 0.7405 | likely_pathogenic | 0.7279 | pathogenic | -1.097 | Destabilizing | 0.995 | D | 0.501 | neutral | None | None | None | None | I |
V/Y | 0.4347 | ambiguous | 0.4045 | ambiguous | -0.788 | Destabilizing | 0.543 | D | 0.491 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.